Reorganization of budding yeast cytoplasm upon energy depletion.
Adenosine Triphosphate
/ metabolism
Cytoplasm
/ metabolism
Electron Microscope Tomography
/ methods
Energy Metabolism
/ physiology
Eukaryotic Initiation Factor-2B
/ metabolism
Organelles
/ metabolism
Saccharomyces cerevisiae
/ metabolism
Saccharomyces cerevisiae Proteins
/ metabolism
Stress, Physiological
/ physiology
Journal
Molecular biology of the cell
ISSN: 1939-4586
Titre abrégé: Mol Biol Cell
Pays: United States
ID NLM: 9201390
Informations de publication
Date de publication:
01 06 2020
01 06 2020
Historique:
pubmed:
16
4
2020
medline:
29
5
2021
entrez:
16
4
2020
Statut:
ppublish
Résumé
Yeast cells, when exposed to stress, can enter a protective state in which cell division, growth, and metabolism are down-regulated. They remain viable in this state until nutrients become available again. How cells enter this protective survival state and what happens at a cellular and subcellular level are largely unknown. In this study, we used electron tomography to investigate stress-induced ultrastructural changes in the cytoplasm of yeast cells. After ATP depletion, we observed significant cytosolic compaction and extensive cytoplasmic reorganization, as well as the emergence of distinct membrane-bound and membraneless organelles. Using correlative light and electron microscopy, we further demonstrated that one of these membraneless organelles was generated by the reversible polymerization of eukaryotic translation initiation factor 2B, an essential enzyme in the initiation of protein synthesis, into large bundles of filaments. The changes we observe are part of a stress-induced survival strategy, allowing yeast cells to save energy, protect proteins from degradation, and inhibit protein functionality by forming assemblies of proteins.
Identifiants
pubmed: 32293990
doi: 10.1091/mbc.E20-02-0125
pmc: PMC7353153
doi:
Substances chimiques
Eukaryotic Initiation Factor-2B
0
Saccharomyces cerevisiae Proteins
0
Adenosine Triphosphate
8L70Q75FXE
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
1232-1245Références
Nat Commun. 2019 Jun 14;10(1):2640
pubmed: 31201334
J Biol Chem. 1983 Jun 10;258(11):7228-35
pubmed: 6853516
Methods Mol Biol. 2016;1369:113-23
pubmed: 26519309
J Cell Biol. 2005 Sep 12;170(6):925-34
pubmed: 16157703
Adv Microb Physiol. 1992;33:145-212
pubmed: 1636508
J Struct Biol. 2017 Apr;198(1):43-53
pubmed: 28246039
Cold Spring Harb Perspect Biol. 2012 Oct 01;4(10):
pubmed: 22815232
J Bacteriol. 1993 Oct;175(19):6358-63
pubmed: 8407810
J Cell Biol. 2003 Oct 27;163(2):257-69
pubmed: 14581454
EMBO J. 1994 Aug 15;13(16):3812-21
pubmed: 8070409
FEBS Lett. 2014 Aug 1;588(15):2457-63
pubmed: 24928445
Elife. 2014 Apr 25;:
pubmed: 24771766
Microbiol Rev. 1993 Jun;57(2):383-401
pubmed: 8393130
J Biol Chem. 2001 Feb 9;276(6):3733-42
pubmed: 11060303
Mol Biol Cell. 2010 Jul 1;21(13):2202-16
pubmed: 20444979
Nature. 2017 Oct 12;550(7675):265-269
pubmed: 28976958
Elife. 2016 Mar 22;5:
pubmed: 27003292
Traffic. 2012 May;13(5):643-9
pubmed: 22289035
Fungal Genet Biol. 2015 Apr;77:50-60
pubmed: 25843913
Elife. 2016 Mar 22;5:
pubmed: 27003290
Mol Biol Cell. 2000 Mar;11(3):833-48
pubmed: 10712503
J Comput Chem. 2004 Oct;25(13):1605-12
pubmed: 15264254
J Biol Chem. 2006 Jan 6;281(1):491-500
pubmed: 16267052
PLoS One. 2010 Oct 28;5(10):e13692
pubmed: 21060891
Nat Commun. 2014 May 23;5:3902
pubmed: 24852487
Proc Natl Acad Sci U S A. 2009 Jun 23;106(25):10147-52
pubmed: 19502427
Arch Microbiol. 2000 Apr;173(4):245-52
pubmed: 10816042
J Gen Microbiol. 1986 Jul;132(7):2023-34
pubmed: 3540191
J Cell Biol. 2011 Jan 10;192(1):111-9
pubmed: 21200030
Mol Cell Biol. 2000 Jun;20(11):3965-76
pubmed: 10805739
Mol Biol Cell. 2015 May 1;26(9):1601-15
pubmed: 25761633
Nature. 2001 Jun 14;411(6839):772-5
pubmed: 11459050
Curr Opin Cell Biol. 2017 Aug;47:34-42
pubmed: 28342303
Nature. 2016 Mar 3;531(7592):122-5
pubmed: 26901872
BMC Biol. 2015 Sep 23;13:80
pubmed: 26400155
J Biol Chem. 1998 Feb 13;273(7):3963-6
pubmed: 9461583
J Struct Biol. 2011 Sep;175(3):288-99
pubmed: 21616153
Yeast. 1999 Sep 15;15(12):1211-22
pubmed: 10487923
J Cell Sci. 2012 Dec 15;125(Pt 24):6127-36
pubmed: 23108672
Elife. 2014 Jul 16;3:e03638
pubmed: 25030911
Biochim Biophys Acta. 2010 May;1798(5):975-85
pubmed: 20116363
J Mol Biol. 2003 Oct 31;333(4):721-45
pubmed: 14568533
Biol Open. 2020 Jul 8;9(7):
pubmed: 32554487
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
Science. 2002 May 3;296(5569):913-6
pubmed: 11988576
Biochem Biophys Res Commun. 1996 Oct 14;227(2):519-23
pubmed: 8878546
Biophys J. 2014 Dec 16;107(12):2761-2766
pubmed: 25517143
Eur J Biochem. 1977 Oct 17;80(1):97-102
pubmed: 21792
J Cell Biol. 2010 Aug 23;190(4):541-51
pubmed: 20713603
Microbiol Mol Biol Rev. 2004 Jun;68(2):187-206
pubmed: 15187181
BMC Res Notes. 2015 Aug 23;8:369
pubmed: 26298101
Genes Dev. 1998 Feb 15;12(4):514-26
pubmed: 9472020
Cell. 2017 Jun 1;169(6):1066-1077.e10
pubmed: 28575670
J Cell Sci. 2016 Jul 15;129(14):2817-28
pubmed: 27252384
Mol Cell Biol. 2015 Feb;35(4):737-46
pubmed: 25512609
J Struct Biol. 2005 Oct;152(1):36-51
pubmed: 16182563
Mol Biol Cell. 2020 Feb 15;31(4):287-303
pubmed: 31851579
Nat Commun. 2019 May 13;10(1):2136
pubmed: 31086188
Proc Natl Acad Sci U S A. 2001 Mar 13;98(6):3150-5
pubmed: 11248047
J Genet Genomics. 2010 May;37(5):281-96
pubmed: 20513629
Cell. 2017 Mar 9;168(6):1028-1040.e19
pubmed: 28283059
Biochim Biophys Acta. 2007 Jun;1768(6):1600-10
pubmed: 17466936
Elife. 2017 Apr 10;6:
pubmed: 28394250
Proc Natl Acad Sci U S A. 2013 Apr 2;110(14):5725-30
pubmed: 23493557
Mol Biol Cell. 2012 May;23(10):1826-37
pubmed: 22456503
Cell Cycle. 2014;13(17):2660-5
pubmed: 25486352
Trends Biochem Sci. 1999 Nov;24(11):437-40
pubmed: 10542411
Annu Rev Biophys. 2008;37:375-97
pubmed: 18573087
FEMS Yeast Res. 2006 Jan;6(1):120-8
pubmed: 16423077
Mol Biol Cell. 2019 Apr 1;30(8):942-958
pubmed: 30726166
J Mol Biol. 1976 Nov;108(1):219-35
pubmed: 826643
J Struct Biol. 1997 Dec;120(3):343-52
pubmed: 9441937
J Cell Sci. 2017 Jan 15;130(2):315-324
pubmed: 28049719
Yale J Biol Med. 2019 Sep 20;92(3):435-452
pubmed: 31543707