Associations of IL6 rs1800795, BLK rs13277113, TIMP3 rs9621532, IL1RL1 rs1041973 and IL1RAP rs4624606 single gene polymorphisms with laryngeal squamous cell carcinoma.
Carcinoma, Squamous Cell
/ genetics
Case-Control Studies
Female
Gene Frequency
/ genetics
Genetic Association Studies
Genetic Predisposition to Disease
Humans
Interleukin-1 Receptor Accessory Protein
/ genetics
Interleukin-1 Receptor-Like 1 Protein
/ genetics
Interleukin-6
/ genetics
Laryngeal Neoplasms
/ genetics
Logistic Models
Male
Middle Aged
Polymorphism, Single Nucleotide
/ genetics
Protein Interaction Maps
/ genetics
Tissue Inhibitor of Metalloproteinase-3
/ genetics
src-Family Kinases
/ genetics
BLK
Gene polymorphism
IL-6
IL1RAP
IL1RL1
Laryngeal squamous cell carcinoma
TIMP3
Journal
Gene
ISSN: 1879-0038
Titre abrégé: Gene
Pays: Netherlands
ID NLM: 7706761
Informations de publication
Date de publication:
15 Jul 2020
15 Jul 2020
Historique:
received:
01
03
2020
revised:
06
04
2020
accepted:
18
04
2020
pubmed:
25
4
2020
medline:
19
5
2020
entrez:
25
4
2020
Statut:
ppublish
Résumé
Survival rate of laryngeal squamous cell carcinoma (LSCC) patients is not improving. To understand more complete biology of LSCC, studies focused on identification of new specific and prognostic markers are performed. The aim of current study was to evaluate the impact of five different single nucleotide polymorphisms (SNP) (IL6 rs1800795, BLK rs13277113, TIMP3 rs9621532, IL1RL1 rs1041973 and IL1RAP rs4624606) on LSCC development. A total of 891 subjects (353 histologically verified LSCC patients and 538 healthy controls) were involved in this study. The genotyping was carried out using the real-time-PCR. Statistical analysis revealed statistically significant associations between TIMP3 rs96215332 variants and LSCC in the codominant (OR = 0.600; 95% CI: 0.390-0.922; p = 0.020), overdominant (OR = 0.599; 95% CI: 0.390-0.922; p = 0.020) and additive (OR = 0.675; 95% CI: 0.459-0.991; p = 0.045) models. Also, significant variants of IL1RAP rs4624606 were determined in the codominant (OR = 1.372; 95% CI: 1.031-1.827; p = 0.030), overdominant (OR = 1.353; 95% CI: 1.018-1.798; p = 0.037) and additive (OR = 1.337; 95% CI: 1.038-1.724; p = 0.025) models. Results of the current study indicate significant associations between TIMP3 rs9621532 and IL1RAP rs4624606 gene polymorphisms and LSCC development.
Identifiants
pubmed: 32330537
pii: S0378-1119(20)30369-3
doi: 10.1016/j.gene.2020.144700
pii:
doi:
Substances chimiques
IL1RAP protein, human
0
IL1RL1 protein, human
0
Interleukin-1 Receptor Accessory Protein
0
Interleukin-1 Receptor-Like 1 Protein
0
Interleukin-6
0
TIMP3 protein, human
0
Tissue Inhibitor of Metalloproteinase-3
0
BLK protein, human
EC 2.7.10.2
src-Family Kinases
EC 2.7.10.2
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
144700Informations de copyright
Copyright © 2020 Elsevier B.V. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.