Self-collection: An appropriate alternative during the SARS-CoV-2 pandemic.
Adolescent
Adult
Aged
Aged, 80 and over
Australia
Betacoronavirus
/ isolation & purification
COVID-19
Child
Coronavirus Infections
/ diagnosis
Female
Humans
Male
Middle Aged
Nasopharynx
/ virology
Nose
/ virology
Pandemics
Pharynx
/ virology
Pneumonia, Viral
/ diagnosis
Prospective Studies
Reproducibility of Results
SARS-CoV-2
Specimen Handling
/ methods
Viral Load
Young Adult
COVID-19
Diagnosis
PCR
Respiratory viruses
SARS-CoV-2
Self-collection
Journal
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology
ISSN: 1873-5967
Titre abrégé: J Clin Virol
Pays: Netherlands
ID NLM: 9815671
Informations de publication
Date de publication:
07 2020
07 2020
Historique:
received:
27
04
2020
accepted:
30
04
2020
pubmed:
14
5
2020
medline:
7
7
2020
entrez:
14
5
2020
Statut:
ppublish
Résumé
To evaluate the reliability of self-collection for SARS-CoV-2 and other respiratory viruses because swab collections for SARS-CoV-2 put health workers at risk of infection and require use of personal protective equipment (PPE). In a prospective study, patients from two states in Australia attending dedicated COVID-19 collection clinics were offered the option to first self-collect (SC) nasal and throat swabs (SCNT) prior to health worker collect (HC) using throat and nasal swabs (Site 1) or throat and nasopharyngeal swabs (Site 2). Samples were analysed for SARS-CoV-2 as well as common respiratory viruses. Concordance of results between methods was assessed using Cohen's kappa (κ) and Cycle threshold (Ct) values were recorded for all positive results as a surrogate measure for viral load. Of 236 patients sampled by HC and SC, 25 had SARS-CoV-2 (24 by HC and 25 by SC) and 63 had other respiratory viruses (56 by HC and 58 by SC). SC was highly concordant with HC (κ = 0.890) for all viruses including SARS-CoV-2 and more concordant than HC to positive results by any method (κ = 0.959 vs 0.933). Mean SARS-CoV-2 E-gene and N-gene, rhinovirus and parainfluenza Ct values did not differ between HC and SCNT. Self-collection of nasal and throat swabs offers a reliable alternative to health worker collection for the diagnosis of SARS-CoV-2 and other respiratory viruses and provides patients with easier access to testing, reduces exposure of the community and health workers to those being tested and reduces requirement for PPE.
Identifiants
pubmed: 32403007
pii: S1386-6532(20)30159-1
doi: 10.1016/j.jcv.2020.104417
pmc: PMC7198188
pii:
doi:
Types de publication
Comparative Study
Evaluation Study
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
104417Informations de copyright
Copyright © 2020 Elsevier B.V. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest All authors declare no competing interests.
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