Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera.
Amino Acid Sequence
Animals
Conserved Sequence
DNA Transposable Elements
Female
Gene Dosage
Genetic Speciation
Genome, Insect
Glycoproteins
/ genetics
Herbivory
/ genetics
Host-Parasite Interactions
/ genetics
Hymenoptera
/ genetics
Immunity
/ genetics
Insect Proteins
/ genetics
Male
Multigene Family
Receptors, Odorant
/ genetics
Social Behavior
Vision, Ocular
/ genetics
hexamerin
major royal jelly protein
microsynteny
odorant receptor
opsin
phytophagy
Journal
Genome biology and evolution
ISSN: 1759-6653
Titre abrégé: Genome Biol Evol
Pays: England
ID NLM: 101509707
Informations de publication
Date de publication:
01 07 2020
01 07 2020
Historique:
accepted:
19
05
2020
pubmed:
23
5
2020
medline:
13
7
2021
entrez:
23
5
2020
Statut:
ppublish
Résumé
The tremendous diversity of Hymenoptera is commonly attributed to the evolution of parasitoidism in the last common ancestor of parasitoid sawflies (Orussidae) and wasp-waisted Hymenoptera (Apocrita). However, Apocrita and Orussidae differ dramatically in their species richness, indicating that the diversification of Apocrita was promoted by additional traits. These traits have remained elusive due to a paucity of sawfly genome sequences, in particular those of parasitoid sawflies. Here, we present comparative analyses of draft genomes of the primarily phytophagous sawfly Athalia rosae and the parasitoid sawfly Orussus abietinus. Our analyses revealed that the ancestral hymenopteran genome exhibited traits that were previously considered unique to eusocial Apocrita (e.g., low transposable element content and activity) and a wider gene repertoire than previously thought (e.g., genes for CO2 detection). Moreover, we discovered that Apocrita evolved a significantly larger array of odorant receptors than sawflies, which could be relevant to the remarkable diversification of Apocrita by enabling efficient detection and reliable identification of hosts.
Identifiants
pubmed: 32442304
pii: 5842140
doi: 10.1093/gbe/evaa106
pmc: PMC7455281
doi:
Substances chimiques
DNA Transposable Elements
0
Glycoproteins
0
Insect Proteins
0
MRJP1 protein, Apis mellifera
0
Receptors, Odorant
0
storage proteins, Insecta
0
Types de publication
Comparative Study
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
1099-1188Subventions
Organisme : NHGRI NIH HHS
ID : U54 HG003273
Pays : United States
Informations de copyright
© The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.
Références
PLoS Genet. 2012;8(8):e1002930
pubmed: 22952454
Genome Biol Evol. 2015 Aug 12;7(8):2407-16
pubmed: 26272716
J Insect Physiol. 2012 Apr;58(4):473-87
pubmed: 22100291
Science. 2011 Mar 18;331(6023):1386
pubmed: 21415334
Dev Biol. 2015 Mar 1;399(1):154-163
pubmed: 25592223
Mol Biol Evol. 2000 Apr;17(4):540-52
pubmed: 10742046
Science. 2007 Jul 6;317(5834):86-94
pubmed: 17615350
Genome Biol. 2016 Oct 11;17(1):211
pubmed: 27802837
Proc Natl Acad Sci U S A. 2011 Apr 5;108(14):5667-72
pubmed: 21282651
Bioinformatics. 2007 Nov 1;23(21):2947-8
pubmed: 17846036
Curr Opin Insect Sci. 2018 Feb;25:65-75
pubmed: 29602364
BMC Evol Biol. 2019 Jan 9;19(1):11
pubmed: 30626321
Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):18012-7
pubmed: 23071321
Heredity (Edinb). 2010 Mar;104(3):270-7
pubmed: 20087393
Nature. 2008 Aug 21;454(7207):955-60
pubmed: 18719581
BMC Genomics. 2015 Aug 07;16:583
pubmed: 26251035
PLoS One. 2012;7(9):e45125
pubmed: 22984621
Genome Res. 2007 Dec;17(12):1898-908
pubmed: 17989259
Nat Biotechnol. 2010 May;28(5):511-5
pubmed: 20436464
Bioinformatics. 2008 Mar 1;24(5):637-44
pubmed: 18218656
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W470-4
pubmed: 21646336
Insect Mol Biol. 2010 Jun 1;19(3):337-46
pubmed: 20201980
PLoS Biol. 2014 Nov 25;12(11):e1002005
pubmed: 25423365
Mol Biol Evol. 2013 Apr;30(4):772-80
pubmed: 23329690
Nature. 2012 Oct 4;490(7418):49-54
pubmed: 22992520
Nat Biotechnol. 2011 May 15;29(7):644-52
pubmed: 21572440
Chromosome Res. 2011 Aug;19(6):809-23
pubmed: 21877225
Curr Opin Struct Biol. 2016 Jun;38:44-52
pubmed: 27309309
Integr Comp Biol. 2015 Nov;55(5):830-42
pubmed: 26319405
Mol Ecol. 2016 Apr;25(8):1769-84
pubmed: 26859767
Annu Rev Entomol. 1998;43:129-51
pubmed: 9444751
Am Nat. 1998 Oct;152(4):635-51
pubmed: 18811369
Genome Res. 2006 Nov;16(11):1385-94
pubmed: 17065613
Proc Natl Acad Sci U S A. 1997 Jun 24;94(13):6815-9
pubmed: 9192648
Genome Res. 2006 Nov;16(11):1334-8
pubmed: 17065606
Cytogenet Genome Res. 2005;110(1-4):462-7
pubmed: 16093699
Science. 2015 Jun 5;348(6239):1139-43
pubmed: 25977371
Genome Res. 2011 Aug;21(8):1339-48
pubmed: 21719571
BMC Bioinformatics. 2005 Feb 15;6:31
pubmed: 15713233
Insect Mol Biol. 2006 Oct;15(5):645-56
pubmed: 17069638
Nucleic Acids Res. 2008 Jun;36(10):3420-35
pubmed: 18445632
J Comp Physiol A. 1992 Jan;170(1):23-40
pubmed: 1573568
Nature. 2011 Nov 23;479(7374):487-92
pubmed: 22113690
Nat Commun. 2017 Aug 17;8(1):297
pubmed: 28819196
Methods. 2016 Jan 15;93:15-23
pubmed: 26318087
Science. 2006 Nov 10;314(5801):941-52
pubmed: 17095691
J Chem Ecol. 2012 Nov;38(11):1366-75
pubmed: 23053922
Mol Biol Evol. 2016 Jun;33(6):1635-8
pubmed: 26921390
Insect Biochem Mol Biol. 2012 Sep;42(9):647-54
pubmed: 22617191
Bioinformatics. 2007 Jan 15;23(2):257-8
pubmed: 17098774
PLoS One. 2010 Jan 19;5(1):e8597
pubmed: 20087411
Naturwissenschaften. 2005 Oct;92(10):464-7
pubmed: 16136295
PeerJ. 2016 Sep 06;4:e2427
pubmed: 27651995
Nature. 2008 Apr 24;452(7190):949-55
pubmed: 18362917
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W182-5
pubmed: 17526522
Nucleic Acids Res. 2012 Jan;40(Database issue):D130-5
pubmed: 22121212
Syst Biol. 2002 Jun;51(3):492-508
pubmed: 12079646
Nucleic Acids Res. 2019 Jan 8;47(D1):D351-D360
pubmed: 30398656
Mol Biol Evol. 2012 Feb;29(2):787-96
pubmed: 22016574
BMC Genomics. 2017 Jul 17;18(1):535
pubmed: 28716078
Nature. 2008 Jun 19;453(7198):1064-71
pubmed: 18563158
Bioinformatics. 2015 Oct 1;31(19):3210-2
pubmed: 26059717
Nature. 2006 Oct 26;443(7114):931-49
pubmed: 17073008
Genome Res. 2008 Jan;18(1):188-96
pubmed: 18025269
Arthropod Struct Dev. 2011 Jan;40(1):2-20
pubmed: 20951828
Heredity (Edinb). 2007 Apr;98(4):189-97
pubmed: 17389895
Dev Genes Evol. 2004 Mar;214(3):128-33
pubmed: 14872342
Science. 2010 Jan 15;327(5963):343-8
pubmed: 20075255
Bioinformatics. 2007 May 1;23(9):1061-7
pubmed: 17332020
Genome Res. 2006 Nov;16(11):1395-403
pubmed: 17065611
Nat Commun. 2014 May 20;5:3636
pubmed: 24845553
Brief Bioinform. 2016 Sep;17(5):877-90
pubmed: 26454094
Appl Entomol Zool. 2017;52(3):497-509
pubmed: 28798494
Science. 2010 Aug 27;329(5995):1068-71
pubmed: 20798317
BMC Evol Biol. 2014 Mar 20;14(1):52
pubmed: 24646345
Insect Biochem Mol Biol. 2007 Oct;37(10):1064-74
pubmed: 17785194
Mol Biol Evol. 2013 Dec;30(12):2725-9
pubmed: 24132122
Genome Res. 2005 Mar;15(3):343-51
pubmed: 15710750
Trends Genet. 2007 Jan;23(1):16-20
pubmed: 17097187
Genome Biol. 2013 Dec 20;14(12):R142
pubmed: 24359881
Insect Biochem Mol Biol. 2005 Dec;35(12):1367-77
pubmed: 16291092
PLoS One. 2013 Dec 27;8(12):e83984
pubmed: 24386321
Proc Natl Acad Sci U S A. 2011 Apr 5;108(14):5673-8
pubmed: 21282631
Genome Biol. 2015 Apr 24;16:76
pubmed: 25908251
Nucleic Acids Res. 2015 Jan;43(Database issue):D714-9
pubmed: 25332403
Nat Genet. 2013 May;45(5):495-500
pubmed: 23525074
Nature. 2010 Aug 5;466(7307):720-6
pubmed: 20686567
Nature. 2013 Jan 24;493(7433):526-31
pubmed: 23254933
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
Genome Res. 2002 Apr;12(4):656-64
pubmed: 11932250
Trends Genet. 2012 Jan;28(1):14-21
pubmed: 21982512
Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1513-8
pubmed: 21187386
Science. 1998 Dec 11;282(5396):2012-8
pubmed: 9851916
Nature. 2007 Jan 4;445(7123):86-90
pubmed: 17167414
Genome Biol. 2007;8(3):R41
pubmed: 17374142
Bioinformatics. 2009 Aug 1;25(15):1972-3
pubmed: 19505945
Science. 2002 Dec 13;298(5601):2157-67
pubmed: 12481130
Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85
pubmed: 26673716
Biol Rev Camb Philos Soc. 2014 May;89(2):255-69
pubmed: 23855350
Curr Biol. 2017 Apr 3;27(7):1013-1018
pubmed: 28343967
Nucleic Acids Res. 2003 Nov 15;31(22):6633-9
pubmed: 14602924
Insect Mol Biol. 2010 Feb;19 Suppl 1:137-46
pubmed: 20167024
Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3574-8
pubmed: 17360684
Nature. 2001 Feb 15;409(6822):860-921
pubmed: 11237011
Genome Biol Evol. 2018 Nov 1;10(11):2997-3011
pubmed: 30335145
Genome Biol. 2013 Apr 25;14(4):R36
pubmed: 23618408
Bioinformatics. 2011 Mar 15;27(6):764-70
pubmed: 21217122
Nature. 2017 May 18;545(7654):340-344
pubmed: 28489826
Genome Biol. 2013 Aug 30;14(8):R93
pubmed: 24000942
Nucleic Acids Res. 2017 Jan 4;45(D1):D744-D749
pubmed: 27899580
Mol Biol Evol. 2017 Sep 1;34(9):2422-2424
pubmed: 28472384
Mol Biol Evol. 2013 Aug;30(8):1987-97
pubmed: 23709260
J Exp Biol. 2014 Mar 15;217(Pt 6):1003-8
pubmed: 24311804
Nature. 2009 Jul 16;460(7253):352-8
pubmed: 19606141
Annu Rev Entomol. 2008;53:361-85
pubmed: 17877453
Nat Methods. 2017 Jun;14(6):587-589
pubmed: 28481363
Insect Mol Biol. 2010 Feb;19 Suppl 1:121-36
pubmed: 20167023
BMC Mol Biol. 2010 Mar 26;11:23
pubmed: 20346164
Mol Biol Evol. 2009 Jun;26(6):1273-87
pubmed: 19252076
Genesis. 2003 Mar;35(3):185-91
pubmed: 12640624
Bioinformatics. 2004 Jan 22;20(2):289-90
pubmed: 14734327
Proc Natl Acad Sci U S A. 2010 May 11;107(19):8677-82
pubmed: 20421492
Genome Biol. 2015 Apr 24;16:83
pubmed: 25908406
Syst Biol. 2006 Aug;55(4):539-52
pubmed: 16785212
Toxins (Basel). 2015 Apr 01;7(4):1126-50
pubmed: 25835385
BMC Bioinformatics. 2009 Dec 15;10:421
pubmed: 20003500
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147
Syst Biol. 2010 May;59(3):307-21
pubmed: 20525638
J Hered. 2013 Sep-Oct;104(5):595-600
pubmed: 23940263
BMC Bioinformatics. 2004 May 14;5:59
pubmed: 15144565
Database (Oxford). 2011 Apr 07;2011:bar008
pubmed: 21474551
Nature. 2002 Dec 5;420(6915):520-62
pubmed: 12466850