Unraveling tumor-immune heterogeneity in advanced ovarian cancer uncovers immunogenic effect of chemotherapy.


Journal

Nature genetics
ISSN: 1546-1718
Titre abrégé: Nat Genet
Pays: United States
ID NLM: 9216904

Informations de publication

Date de publication:
06 2020
Historique:
received: 01 10 2018
accepted: 20 04 2020
pubmed: 3 6 2020
medline: 2 9 2020
entrez: 3 6 2020
Statut: ppublish

Résumé

In metastatic cancer, the degree of heterogeneity of the tumor microenvironment (TME) and its molecular underpinnings remain largely unstudied. To characterize the tumor-immune interface at baseline and during neoadjuvant chemotherapy (NACT) in high-grade serous ovarian cancer (HGSOC), we performed immunogenomic analysis of treatment-naive and paired samples from before and after treatment with chemotherapy. In treatment-naive HGSOC, we found that immune-cell-excluded and inflammatory microenvironments coexist within the same individuals and within the same tumor sites, indicating ubiquitous variability in immune cell infiltration. Analysis of TME cell composition, DNA copy number, mutations and gene expression showed that immune cell exclusion was associated with amplification of Myc target genes and increased expression of canonical Wnt signaling in treatment-naive HGSOC. Following NACT, increased natural killer (NK) cell infiltration and oligoclonal expansion of T cells were detected. We demonstrate that the tumor-immune microenvironment of advanced HGSOC is intrinsically heterogeneous and that chemotherapy induces local immune activation, suggesting that chemotherapy can potentiate the immunogenicity of immune-excluded HGSOC tumors.

Identifiants

pubmed: 32483290
doi: 10.1038/s41588-020-0630-5
pii: 10.1038/s41588-020-0630-5
pmc: PMC8353209
mid: NIHMS1717099
doi:

Substances chimiques

Cisplatin Q20Q21Q62J

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

582-593

Subventions

Organisme : Cancer Research UK
ID : A19274
Pays : United Kingdom
Organisme : Cancer Research UK
ID : C9685/A25177
Pays : United Kingdom
Organisme : Department of Health
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A15973
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A22905
Pays : United Kingdom
Organisme : Cancer Research UK
ID : 15601
Pays : United Kingdom
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : NCI NIH HHS
ID : P30 CA008748
Pays : United States
Organisme : Cancer Research UK
ID : C14303/A17197
Pays : United Kingdom

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Auteurs

Alejandro Jiménez-Sánchez (A)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.
Department of Computational and Systems Biology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Paulina Cybulska (P)

Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Katherine LaVigne Mager (KL)

Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Simon Koplev (S)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Oliver Cast (O)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Dominique-Laurent Couturier (DL)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Danish Memon (D)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.
European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Cambridge, UK.

Pier Selenica (P)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Ines Nikolovski (I)

Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Yousef Mazaheri (Y)

Department of Medical Physics and Radiology, Memorial Sloan Kettering Cancer Centre, New York, NY, USA.

Yonina Bykov (Y)

Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Felipe C Geyer (FC)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Geoff Macintyre (G)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.
Spanish National Cancer Research Centre (CNIO), Madrid, Spain.

Lena Morrill Gavarró (LM)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Ruben M Drews (RM)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Michael B Gill (MB)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Anastasios D Papanastasiou (AD)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Ramon E Sosa (RE)

Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Robert A Soslow (RA)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Tyler Walther (T)

Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Ronglai Shen (R)

Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Dennis S Chi (DS)

Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Kay J Park (KJ)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Travis Hollmann (T)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Jorge S Reis-Filho (JS)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Florian Markowetz (F)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Pedro Beltrao (P)

European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Cambridge, UK.

Hebert Alberto Vargas (HA)

Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Dmitriy Zamarin (D)

Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

James D Brenton (JD)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Alexandra Snyder (A)

Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Britta Weigelt (B)

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Evis Sala (E)

Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Department of Radiology and Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK.

Martin L Miller (ML)

Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Cambridge, UK. martin.miller@cruk.cam.ac.uk.

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