Designing an optimized diagnostic network to improve access to TB diagnosis and treatment in Lesotho.
Antibiotics, Antitubercular
/ therapeutic use
Clinical Laboratory Services
Community Networks
DNA, Bacterial
/ genetics
Drug Resistance, Bacterial
Humans
Lesotho
/ epidemiology
Microbial Sensitivity Tests
/ methods
Models, Theoretical
Mycobacterium tuberculosis
/ genetics
Nucleic Acid Amplification Techniques
/ methods
Point-of-Care Systems
Rifampin
/ therapeutic use
Software
Tuberculosis, Pulmonary
/ diagnosis
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2020
2020
Historique:
received:
15
01
2020
accepted:
08
05
2020
entrez:
4
6
2020
pubmed:
4
6
2020
medline:
22
8
2020
Statut:
epublish
Résumé
To reach WHO End tuberculosis (TB) targets, countries need a quality-assured laboratory network equipped with rapid diagnostics for tuberculosis diagnosis and drug susceptibility testing. Diagnostic network analysis aims to inform instrument placement, sample referral, staffing, geographical prioritization, integration of testing enabling targeted investments and programming to meet priority needs. Supply chain modelling and optimization software was used to map Lesotho's TB diagnostic network using available data sources, including laboratory and programme reports and health and demographic surveys. Various scenarios were analysed, including current network configuration and inclusion of additional GeneXpert and/or point of care instruments. Different levels of estimated demand for testing services were modelled (current [30,000 tests/year], intermediate [41,000 tests/year] and total demand needed to find all TB cases [88,000 tests/year]). Lesotho's GeneXpert capacity is largely well-located but under-utilized (19/24 sites use under 50% capacity). The network has sufficient capacity to meet current and near-future demand and 70% of estimated total demand. Relocation of 13 existing instruments would deliver equivalent access to services, maintain turnaround time and reduce costs compared with planned procurement of 7 more instruments. Gaps exist in linking people with positive symptom screens to testing; closing this gap would require extra 11,000 tests per year and result in 1000 additional TB patients being treated. Closing the gap in linking diagnosed patients to treatment would result in a further 629 patients being treated. Scale up of capacity to meet total demand will be best achieved using a point-of-care platform in addition to the existing GeneXpert footprint. Analysis of TB diagnostic networks highlighted key gaps and opportunities to optimize services. Network mapping and optimization should be considered an integral part of strategic planning. By building efficient and patient-centred diagnostic networks, countries will be better equipped to meet End TB targets.
Sections du résumé
BACKGROUND
To reach WHO End tuberculosis (TB) targets, countries need a quality-assured laboratory network equipped with rapid diagnostics for tuberculosis diagnosis and drug susceptibility testing. Diagnostic network analysis aims to inform instrument placement, sample referral, staffing, geographical prioritization, integration of testing enabling targeted investments and programming to meet priority needs.
METHODS
Supply chain modelling and optimization software was used to map Lesotho's TB diagnostic network using available data sources, including laboratory and programme reports and health and demographic surveys. Various scenarios were analysed, including current network configuration and inclusion of additional GeneXpert and/or point of care instruments. Different levels of estimated demand for testing services were modelled (current [30,000 tests/year], intermediate [41,000 tests/year] and total demand needed to find all TB cases [88,000 tests/year]).
RESULTS
Lesotho's GeneXpert capacity is largely well-located but under-utilized (19/24 sites use under 50% capacity). The network has sufficient capacity to meet current and near-future demand and 70% of estimated total demand. Relocation of 13 existing instruments would deliver equivalent access to services, maintain turnaround time and reduce costs compared with planned procurement of 7 more instruments. Gaps exist in linking people with positive symptom screens to testing; closing this gap would require extra 11,000 tests per year and result in 1000 additional TB patients being treated. Closing the gap in linking diagnosed patients to treatment would result in a further 629 patients being treated. Scale up of capacity to meet total demand will be best achieved using a point-of-care platform in addition to the existing GeneXpert footprint.
CONCLUSIONS
Analysis of TB diagnostic networks highlighted key gaps and opportunities to optimize services. Network mapping and optimization should be considered an integral part of strategic planning. By building efficient and patient-centred diagnostic networks, countries will be better equipped to meet End TB targets.
Identifiants
pubmed: 32492022
doi: 10.1371/journal.pone.0233620
pii: PONE-D-19-34411
pmc: PMC7269260
doi:
Substances chimiques
Antibiotics, Antitubercular
0
DNA, Bacterial
0
Rifampin
VJT6J7R4TR
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0233620Déclaration de conflit d'intérêts
The authors have read the journal's policy and the authors of the manuscript have the following competing interests: This study was funded by UK Aid from the UK government through a grant to the Foundation for Innovative New Diagnostics (FIND). FIND provided support for this study in the form of salaries for employees, HA, KK and ZK, and provided funding to LLamasoft through a consulting services agreement which covered consultancy fees for RP and YW. FIND participated in the development, evaluation and demonstration of the Xpert MTB/RIF assay, and provides technical assistance to countries for roll out. FIND has partnership agreements with various diagnostic manufacturers, including Cepheid Inc. for development and implementation of diagnostic tools. RP is an employee of LLamasoft Inc., a private supply chain management software company that developed and provides consulting services for use of the software used in the study. This does not alter our adherence to PLOS ONE policies on sharing data and materials. There are no patents, products in development or marketed products associated with this research to declare.
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