Large-Scale Image Analysis for Investigating Spatio-Temporal Changes in Nuclear DNA Damage Caused by Nitrogen Atmospheric Pressure Plasma Jets.


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
10 Jun 2020
Historique:
received: 09 05 2020
revised: 02 06 2020
accepted: 08 06 2020
entrez: 14 6 2020
pubmed: 14 6 2020
medline: 26 3 2021
Statut: epublish

Résumé

The effective clinical application of atmospheric pressure plasma jet (APPJ) treatments requires a well-founded methodology that can describe the interactions between the plasma jet and a treated sample and the temporal and spatial changes that result from the treatment. In this study, we developed a large-scale image analysis method to identify the cell-cycle stage and quantify damage to nuclear DNA in single cells. The method was then tested and used to examine spatio-temporal distributions of nuclear DNA damage in two cell lines from the same anatomic location, namely the oral cavity, after treatment with a nitrogen APPJ. One cell line was malignant, and the other, nonmalignant. The results showed that DNA damage in cancer cells was maximized at the plasma jet treatment region, where the APPJ directly contacted the sample, and declined radially outward. As incubation continued, DNA damage in cancer cells decreased slightly over the first 4 h before rapidly decreasing by approximately 60% at 8 h post-treatment. In nonmalignant cells, no damage was observed within 1 h after treatment, but damage was detected 2 h after treatment. Notably, the damage was 5-fold less than that detected in irradiated cancer cells. Moreover, examining damage with respect to the cell cycle showed that S phase cells were more susceptible to DNA damage than either G1 or G2 phase cells. The proposed methodology for large-scale image analysis is not limited to APPJ post-treatment applications and can be utilized to evaluate biological samples affected by any type of radiation, and, more so, the cell-cycle classification can be used on any cell type with any nuclear DNA staining.

Identifiants

pubmed: 32531879
pii: ijms21114127
doi: 10.3390/ijms21114127
pmc: PMC7312173
pii:
doi:

Substances chimiques

Plasma Gases 0
Nitrogen N762921K75

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NCI NIH HHS
ID : R01 CA109545
Pays : United States
Organisme : U.S. Department of Energy
ID : DE-FC02-04ER15533

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Auteurs

Xu Han (X)

Radiation Laboratory, University of Notre Dame, Notre Dame, IN 46556, USA.
Department of Physics, University of Notre Dame, Notre Dame, IN 46556, USA.

James Kapaldo (J)

Radiation Laboratory, University of Notre Dame, Notre Dame, IN 46556, USA.
Department of Physics, University of Notre Dame, Notre Dame, IN 46556, USA.

Yueying Liu (Y)

Harper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556, USA.

M Sharon Stack (MS)

Harper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556, USA.
Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.

Elahe Alizadeh (E)

Queen's CardioPulmonary Unit (QCPU), Department of Medicine, Queen's University, Kingston, ON K7L 3J9, Canada.

Sylwia Ptasinska (S)

Radiation Laboratory, University of Notre Dame, Notre Dame, IN 46556, USA.
Department of Physics, University of Notre Dame, Notre Dame, IN 46556, USA.

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Classifications MeSH