Revisiting the Classification of Percid Perhabdoviruses Using New Full-Length Genomes.
Perhabdovirus
Rhabdoviridae
complete genome
fish
nucleoprotein
percid
phylogenetic analysis
virus detection
Journal
Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722
Informations de publication
Date de publication:
16 06 2020
16 06 2020
Historique:
received:
17
04
2020
revised:
05
06
2020
accepted:
11
06
2020
entrez:
21
6
2020
pubmed:
21
6
2020
medline:
20
2
2021
Statut:
epublish
Résumé
Perhabdoviruses are a threat to some freshwater fish species raised in aquaculture farms in Europe. Although the genetic diversity of these viruses is suspected to be high, the classification of isolates is still in its infancy, with just one full-length genome available and only partial sequences for a limited number of others. Here, we characterized a series of viruses isolated from percids in France from 1999 to 2009 by sequencing the nucleoprotein (N) gene. Four main clusters were distinguished, all related at varying levels of similarity to one of the two already-recognized species, namely
Identifiants
pubmed: 32560066
pii: v12060649
doi: 10.3390/v12060649
pmc: PMC7354598
pii:
doi:
Substances chimiques
Viral Proteins
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
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