Position of Deltaproteobacteria Cas12e nuclease cleavage sites depends on spacer length of guide RNA.
Base Sequence
Binding Sites
CRISPR-Associated Proteins
/ metabolism
CRISPR-Cas Systems
Clustered Regularly Interspaced Short Palindromic Repeats
Computational Biology
/ methods
Gene Editing
Models, Molecular
Nucleic Acid Conformation
RNA Cleavage
RNA, Guide, Kinetoplastida
/ genetics
Recombinant Proteins
AsCas12a
AsCpf1
CRISPR-Cas
CasX
DpbCas12e
SpCas9
cut site mapping
sgRNA
Journal
RNA biology
ISSN: 1555-8584
Titre abrégé: RNA Biol
Pays: United States
ID NLM: 101235328
Informations de publication
Date de publication:
10 2020
10 2020
Historique:
pubmed:
23
6
2020
medline:
9
7
2021
entrez:
23
6
2020
Statut:
ppublish
Résumé
Cas12e proteins (formerly CasX) form a distinct subtype of Class II type V CRISPR-Cas effectors. Recently, it was shown that DpbCas12e from
Identifiants
pubmed: 32564655
doi: 10.1080/15476286.2020.1777378
pmc: PMC7549622
doi:
Substances chimiques
CRISPR-Associated Proteins
0
RNA, Guide
0
Recombinant Proteins
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
1472-1479Références
Nat Biotechnol. 2016 Aug;34(8):863-8
pubmed: 27272384
Science. 2019 Apr 19;364(6437):286-289
pubmed: 31000663
Mol Cell. 2017 Apr 20;66(2):221-233.e4
pubmed: 28431230
Nature. 2015 Apr 9;520(7546):186-91
pubmed: 25830891
Cell. 2015 Oct 22;163(3):759-71
pubmed: 26422227
Science. 2019 Jul 5;365(6448):48-53
pubmed: 31171706
Annu Rev Biochem. 2016 Jun 2;85:227-64
pubmed: 27145843
Nat Biotechnol. 2017 Jan;35(1):31-34
pubmed: 27918548
Nature. 2016 Apr 28;532(7600):517-21
pubmed: 27096362
Nat Methods. 2017 Jun;14(6):607-614
pubmed: 28459458
Nature. 2019 Feb;566(7743):218-223
pubmed: 30718774
Nat Commun. 2017 Nov 10;8(1):1424
pubmed: 29127284
Nucleic Acids Res. 2017 May 19;45(9):e74
pubmed: 28115632
Science. 2012 Aug 17;337(6096):816-21
pubmed: 22745249
Nat Commun. 2017 May 12;8:15058
pubmed: 28497783
Nat Commun. 2017 Feb 21;8:14500
pubmed: 28220790
Nat Methods. 2017 Jun;14(6):600-606
pubmed: 28459459
Cell Discov. 2018 Nov 27;4:63
pubmed: 30510770
Nature. 2019 Dec;576(7785):149-157
pubmed: 31634902
Nature. 2017 Oct 12;550(7675):280-284
pubmed: 28976959
Mol Ther. 2016 Mar;24(3):645-54
pubmed: 26782639
Nature. 2017 Feb 9;542(7640):237-241
pubmed: 28005056
Cell. 2016 May 5;165(4):949-62
pubmed: 27114038
Cell. 2014 Feb 27;156(5):935-49
pubmed: 24529477
Nat Methods. 2015 Mar;12(3):237-43, 1 p following 243
pubmed: 25664545
Nat Rev Microbiol. 2011 Jun;9(6):467-77
pubmed: 21552286
Science. 2013 Feb 15;339(6121):819-23
pubmed: 23287718
ACS Synth Biol. 2016 Dec 16;5(12):1383-1388
pubmed: 27294364