Rapid isolation of rare targets from large fluid volumes.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
27 07 2020
Historique:
received: 01 05 2020
accepted: 26 06 2020
entrez: 29 7 2020
pubmed: 29 7 2020
medline: 15 12 2020
Statut: epublish

Résumé

Rapidly isolating rare targets from larger, clinically relevant fluid volumes remains an unresolved problem in biomedicine and diagnosis. Here, we describe how 3D particle sorting can enrich targets at ultralow concentrations over 100-fold within minutes not possible with conventional approaches. Current clinical devices based on biochemical extraction and microfluidic solutions typically require high concentrations and/or can only process sub-milliliter volumes in time. In a proof-of-concept application, we isolated bacteria from whole blood as demanded for rapid sepsis diagnosis where minimal numbers of bacteria need to be found in a 1-10 mL blood sample. After sample encapsulation in droplets and target enrichment with the 3D particle sorter within a few minutes, downstream analyses were able to identify bacteria and test for antibiotic susceptibility, information which is critical for successful treatment of bloodstream infections.

Identifiants

pubmed: 32719382
doi: 10.1038/s41598-020-69315-1
pii: 10.1038/s41598-020-69315-1
pmc: PMC7385493
doi:

Types de publication

Evaluation Study Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

12458

Subventions

Organisme : NIAID NIH HHS
ID : R01 AI117061
Pays : United States
Organisme : NIGMS NIH HHS
ID : P41 GM103540
Pays : United States

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Auteurs

Per Niklas Hedde (PN)

Department of Biomedical Engineering, University of California, Irvine, CA, USA. phedde@uci.edu.
Department of Biochemistry, University of Hawaii at Manoa, Manoa, HI, USA. phedde@uci.edu.

Margaux Bouzin (M)

Department of Biomedical Engineering, University of California, Irvine, CA, USA.
Physics Department, Università degli Studi di Milano-Bicocca, Milan, Italy.

Timothy J Abram (TJ)

Velox Biosystems, Irvine, CA, USA.

Xiaoming Chen (X)

Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, CA, USA.

Melody N Toosky (MN)

Velox Biosystems, Irvine, CA, USA.

Tam Vu (T)

Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, CA, USA.

Yiyan Li (Y)

Department of Physics and Engineering, Fort Lewis College, Durango, CO, USA.

Weian Zhao (W)

Department of Biomedical Engineering, University of California, Irvine, CA, USA.
Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, CA, USA.
Sue and Bill Gross Stem Cell Research Center, University of California, Irvine, Irvine, CA, USA.
Chao Family Comprehensive Cancer Center, University of California, Irvine, Irvine, CA, USA.
Edwards Life Sciences Center for Advanced Cardiovascular Technology, University of California, Irvine, Irvine, CA, USA.
Department of Biological Chemistry, University of California, Irvine, Irvine, CA, USA.

Enrico Gratton (E)

Department of Biomedical Engineering, University of California, Irvine, CA, USA.

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