A CRISPRi-dCas9 System for Archaea and Its Use To Examine Gene Function during Nitrogen Fixation by Methanosarcina acetivorans.


Journal

Applied and environmental microbiology
ISSN: 1098-5336
Titre abrégé: Appl Environ Microbiol
Pays: United States
ID NLM: 7605801

Informations de publication

Date de publication:
15 10 2020
Historique:
received: 15 06 2020
accepted: 15 08 2020
pubmed: 23 8 2020
medline: 2 12 2020
entrez: 23 8 2020
Statut: epublish

Résumé

CRISPR-based systems are emerging as the premier method to manipulate many cellular processes. In this study, a simple and efficient CRISPR interference (CRISPRi) system for targeted gene repression in archaea was developed. The

Identifiants

pubmed: 32826220
pii: AEM.01402-20
doi: 10.1128/AEM.01402-20
pmc: PMC7580536
pii:
doi:

Substances chimiques

Archaeal Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright © 2020 American Society for Microbiology.

Références

FEBS J. 2010 Nov;277(21):4398-411
pubmed: 20875081
Arch Microbiol. 2008 Sep;190(3):319-32
pubmed: 18415079
Mol Microbiol. 2003 Jan;47(1):235-46
pubmed: 12492867
RNA Biol. 2017 Nov 2;14(11):1544-1558
pubmed: 28296572
Nature. 2013 Mar 7;495(7439):50-1
pubmed: 23467164
Annu Rev Microbiol. 1995;49:335-66
pubmed: 8561464
Appl Environ Microbiol. 1993 Nov;59(11):3832-9
pubmed: 16349092
FEMS Microbiol Lett. 2007 Jun;271(2):281-8
pubmed: 17456186
Cell. 2013 Feb 28;152(5):1173-83
pubmed: 23452860
Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2626-31
pubmed: 9122246
Proc Natl Acad Sci U S A. 2017 Mar 14;114(11):2976-2981
pubmed: 28265068
Metallomics. 2018 Apr 25;10(4):523-538
pubmed: 29629463
BMC Genomics. 2012 May 03;13:162
pubmed: 22554235
Nat Rev Microbiol. 2004 Aug;2(8):621-31
pubmed: 15263897
ISME J. 2019 Sep;13(9):2173-2182
pubmed: 31053830
G3 (Bethesda). 2016 Oct 13;6(10):3161-3168
pubmed: 27507792
Biol Res. 2018 Oct 5;51(1):37
pubmed: 30290805
Nature. 2012 Feb 15;482(7385):331-8
pubmed: 22337052
Nat Commun. 2019 Oct 22;10(1):4797
pubmed: 31641111
Bioessays. 2014 Jan;36(1):34-8
pubmed: 24323919
Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14829-33
pubmed: 26627238
Nat Protoc. 2013 Nov;8(11):2180-96
pubmed: 24136345
Annu Rev Microbiol. 2007;61:349-77
pubmed: 17506680
Nat Rev Microbiol. 2008 Aug;6(8):579-91
pubmed: 18587410
FEBS J. 2014 Dec;281(23):5186-93
pubmed: 25315507
Front Plant Sci. 2017 Nov 14;8:1947
pubmed: 29250084
Mol Ther Nucleic Acids. 2015 Nov 17;4:e264
pubmed: 26575098
J Bacteriol. 1988 May;170(5):2148-52
pubmed: 3162907
J Nutr. 2000 May;130(5):1081-4
pubmed: 10801900
Cell. 2013 Jul 18;154(2):442-51
pubmed: 23849981
Annu Rev Genet. 2011;45:273-97
pubmed: 22060043
Annu Rev Biochem. 2016 Jun 2;85:455-83
pubmed: 26844394
Methods. 2020 Feb 1;172:76-85
pubmed: 31150759
Nucleic Acids Res. 2014 Apr;42(8):5280-8
pubmed: 24603867
J Biol Inorg Chem. 2015 Mar;20(2):435-45
pubmed: 25491285
Science. 2012 Aug 17;337(6096):816-21
pubmed: 22745249
Microb Cell Fact. 2017 Feb 8;16(1):25
pubmed: 28179021
Nat Rev Microbiol. 2015 Nov;13(11):722-36
pubmed: 26411297
J Mol Biol. 2019 Sep 20;431(20):4184-4201
pubmed: 31260691
Nat Protoc. 2013 Nov;8(11):2281-2308
pubmed: 24157548
Archaea. 2008 Dec;2(3):193-203
pubmed: 19054746
Nat Rev Microbiol. 2011 Jun;9(6):467-77
pubmed: 21552286
J Bacteriol. 2005 Nov;187(22):7784-94
pubmed: 16267302
ACS Synth Biol. 2013 Oct 18;2(10):604-13
pubmed: 23977949
Curr Issues Mol Biol. 2000 Oct;2(4):125-31
pubmed: 11471757
J Biol Chem. 2016 Jul 15;291(29):15226-42
pubmed: 27226589
Nucleic Acids Res. 2015 Jan;43(1):406-17
pubmed: 25505143
Genome Res. 2002 Apr;12(4):532-42
pubmed: 11932238

Auteurs

Ahmed E Dhamad (AE)

Department of Biological Sciences, University of Arkansas-Fayetteville, Fayetteville, Arkansas, USA.
Department of Biological Sciences, Wasit University, Wasit, Iraq.

Daniel J Lessner (DJ)

Department of Biological Sciences, University of Arkansas-Fayetteville, Fayetteville, Arkansas, USA dlessner@uark.edu.

Articles similaires

Prader-Willi Syndrome Humans Angelman Syndrome CRISPR-Cas Systems Human Embryonic Stem Cells
Gene Editing Climate Change Africa South of the Sahara Crops, Agricultural Agriculture
Animals Humans CRISPR-Cas Systems Mice Vascular Endothelial Growth Factor A
Animals CRISPR-Cas Systems Gene Editing Animals, Genetically Modified Livestock

Classifications MeSH