Reconstruction of the birth of a male sex chromosome present in Atlantic herring.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
29 09 2020
Historique:
pubmed: 18 9 2020
medline: 19 12 2020
entrez: 17 9 2020
Statut: ppublish

Résumé

The mechanisms underlying sex determination are astonishingly plastic. Particularly the triggers for the molecular machinery, which recalls either the male or female developmental program, are highly variable and have evolved independently and repeatedly. Fish show a huge variety of sex determination systems, including both genetic and environmental triggers. The advent of sex chromosomes is assumed to stabilize genetic sex determination. However, because sex chromosomes are notoriously cluttered with repetitive DNA and pseudogenes, the study of their evolution is hampered. Here we reconstruct the birth of a Y chromosome present in the Atlantic herring. The region is tiny (230 kb) and contains only three intact genes. The candidate male-determining gene

Identifiants

pubmed: 32938798
pii: 2009925117
doi: 10.1073/pnas.2009925117
pmc: PMC7533707
doi:

Substances chimiques

Fish Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

24359-24368

Informations de copyright

Copyright © 2020 the Author(s). Published by PNAS.

Déclaration de conflit d'intérêts

The authors declare no competing interest.

Références

Sex Dev. 2014;8(1-3):7-19
pubmed: 24335102
Nature. 1998 Jun 11;393(6685):583-7
pubmed: 9634235
Mol Cell Endocrinol. 2003 Dec 15;211(1-2):65-73
pubmed: 14656478
Nat Protoc. 2012 Jul 19;7(8):1511-22
pubmed: 22814390
Proc Natl Acad Sci U S A. 2020 Jun 16;117(24):13783-13791
pubmed: 32467169
Annu Rev Anim Biosci. 2019 Feb 15;7:149-172
pubmed: 30303691
Hum Mutat. 2020 Sep;41(9):1671-1679
pubmed: 32516842
Elife. 2016 May 03;5:
pubmed: 27138043
EMBO J. 2015 Feb 3;34(3):379-92
pubmed: 25535245
PLoS Genet. 2015 Mar 24;11(3):e1005063
pubmed: 25803043
Mol Syst Biol. 2011 Oct 11;7:539
pubmed: 21988835
Nucleic Acids Res. 2002 Jul 15;30(14):3059-66
pubmed: 12136088
Chromosome Res. 2012 Jan;20(1):139-51
pubmed: 22167552
Bioinformatics. 2008 Mar 1;24(5):637-44
pubmed: 18218656
PLoS One. 2013 Nov 28;8(11):e81551
pubmed: 24312319
Mol Biol Evol. 2013 Apr;30(4):772-80
pubmed: 23329690
Trends Cell Biol. 2017 Feb;27(2):101-109
pubmed: 27825709
Genetics. 2010 Sep;186(1):9-31
pubmed: 20855574
EMBO Rep. 2015 Oct;16(10):1260-74
pubmed: 26358957
Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):6823-8
pubmed: 23530196
Genome Res. 2010 Sep;20(9):1297-303
pubmed: 20644199
Genome Res. 2004 May;14(5):988-95
pubmed: 15123596
Bioinformatics. 2019 Feb 1;35(3):526-528
pubmed: 30016406
PLoS Genet. 2010 Feb 12;6(2):e1000844
pubmed: 20169179
Mol Biol Evol. 2007 Aug;24(8):1586-91
pubmed: 17483113
PLoS One. 2014 Sep 23;9(9):e108475
pubmed: 25248153
Heredity (Edinb). 2005 Aug;95(2):118-28
pubmed: 15931241
Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W609-12
pubmed: 16845082
Genome Res. 2008 Jan;18(1):188-96
pubmed: 18025269
EMBO J. 2020 Feb 17;39(4):e102723
pubmed: 31880004
Dev Comp Immunol. 2004 May 3;28(5):461-85
pubmed: 15062644
Genome Res. 2019 Nov;29(11):1919-1928
pubmed: 31649060
Proc Natl Acad Sci U S A. 2002 Feb 19;99(4):2026-31
pubmed: 11842223
Bioinformatics. 2011 Aug 1;27(15):2156-8
pubmed: 21653522
Elife. 2017 Feb 23;6:
pubmed: 28226241
Nature. 2018 Jul;559(7714):392-395
pubmed: 29973726
Eur J Hum Genet. 2010 Nov;18(11):1178-84
pubmed: 20648059
Nature. 2001 Oct 11;413(6856):603-9
pubmed: 11595941
Proc Natl Acad Sci U S A. 2017 Apr 25;114(17):E3452-E3461
pubmed: 28389569
Nat Cell Biol. 2006 Oct;8(10):1149-54
pubmed: 16964244
Database (Oxford). 2011 Mar 29;2011:bar009
pubmed: 21447597
PLoS Genet. 2019 Aug 22;15(8):e1008013
pubmed: 31437150
Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E344-E346
pubmed: 29305558
Sci Signal. 2009 Oct 27;2(94):ra68
pubmed: 19861689
J Mol Biol. 1997 Apr 25;268(1):78-94
pubmed: 9149143
J Hered. 2017 Jan;108(1):3-11
pubmed: 27388336
Mol Ecol. 2018 Oct;27(19):3950-3963
pubmed: 29451715
Proc Natl Acad Sci U S A. 2004 May 25;101(21):8011-6
pubmed: 15141090
Gen Comp Endocrinol. 2016 Dec 1;239:80-88
pubmed: 26449160
Elife. 2015 Dec 09;4:
pubmed: 26650356
Evolution. 1987 Jul;41(4):911-914
pubmed: 28564364
Annu Rev Physiol. 2012;74:453-75
pubmed: 22017176
Nat Commun. 2018 Jul 18;9(1):2809
pubmed: 30022052
Evolution. 1984 Nov;38(6):1358-1370
pubmed: 28563791
PLoS Curr. 2013 Apr 18;5:
pubmed: 23653398
PLoS One. 2008;3(10):e3569
pubmed: 18974790
Nature. 1996 Jun 13;381(6583):620-3
pubmed: 8637600
Cold Spring Harb Perspect Biol. 2017 Jul 5;9(7):
pubmed: 28062561
Syst Biol. 2010 May;59(3):307-21
pubmed: 20525638
Genome Biol. 2020 Jul 19;21(1):177
pubmed: 32684159
Genes (Basel). 2018 Oct 04;9(10):
pubmed: 30287777
PLoS Biol. 2014 Jul 01;12(7):e1001899
pubmed: 24983465

Auteurs

Nima Rafati (N)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.
Science for Life Laboratory, National Bioinformatics Infrastructure Sweden, Uppsala University, 75237 Uppsala, Sweden.

Junfeng Chen (J)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Amaury Herpin (A)

UR 1037 Fish Physiology and Genomics, INRAE, F-35000 Rennes, France.
State Key Laboratory of Developmental Biology of Freshwater Fish, College of Life Sciences, Hunan Normal University, Changsha 410081, China.

Mats E Pettersson (ME)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Fan Han (F)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Chungang Feng (C)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Ola Wallerman (O)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Carl-Johan Rubin (CJ)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Sandrine Péron (S)

UR 1037 Fish Physiology and Genomics, INRAE, F-35000 Rennes, France.

Arianna Cocco (A)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Mårten Larsson (M)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden.

Christian Trötschel (C)

Fakultät für Biologie und Biotechnologie, Ruhr-Universität Bochum, 44801 Bochum, Germany.

Ansgar Poetsch (A)

Fakultät für Biologie und Biotechnologie, Ruhr-Universität Bochum, 44801 Bochum, Germany.
Center for Marine and Molecular Biotechnology, Pilot National Laboratory for Marine Science and Technology (Qingdao), 266237 Qinqdao, China.
College of Marine Life Sciences, Ocean University of China, 266100 Qingdao, China.

Kai Korsching (K)

Molecular Sensory Systems, Center of Advanced European Studies and Research, 53175 Bonn, Germany.

Wolfgang Bönigk (W)

Molecular Sensory Systems, Center of Advanced European Studies and Research, 53175 Bonn, Germany.

Heinz G Körschen (HG)

Molecular Sensory Systems, Center of Advanced European Studies and Research, 53175 Bonn, Germany.

Florian Berg (F)

Department of Biological Sciences, University of Bergen, 5020 Bergen, Norway.
Institute of Marine Research, 5817 Bergen, Norway.

Arild Folkvord (A)

Department of Biological Sciences, University of Bergen, 5020 Bergen, Norway.
Institute of Marine Research, 5817 Bergen, Norway.

U Benjamin Kaupp (UB)

Molecular Sensory Systems, Center of Advanced European Studies and Research, 53175 Bonn, Germany.
Life & Medical Sciences Institute, University of Bonn, 53115 Bonn, Germany.

Manfred Schartl (M)

Developmental Biochemistry, Biocenter, University of Würzburg, 97074 Würzburg, Germany.
Hagler Institute for Advanced Study, Texas A&M University, College Station, TX 77843.
Xiphophorus Genetic Stock Center, Texas State University, San Marcos, TX 78666.

Leif Andersson (L)

Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, 75123 Uppsala, Sweden; leif.andersson@imbim.uu.se.
Department of Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843.
Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, 75007 Uppsala, Sweden.

Articles similaires

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male
Humans Meals Time Factors Female Adult

Classifications MeSH