Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2.


Journal

Cell host & microbe
ISSN: 1934-6069
Titre abrégé: Cell Host Microbe
Pays: United States
ID NLM: 101302316

Informations de publication

Date de publication:
07 10 2020
Historique:
received: 08 07 2020
revised: 13 08 2020
accepted: 27 08 2020
pubmed: 18 9 2020
medline: 27 10 2020
entrez: 17 9 2020
Statut: ppublish

Résumé

B cells are critical for the production of antibodies and protective immunity to viruses. Here we show that patients infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) who develop coronavirus disease 2019 (COVID-19) display early recruitment of B cells expressing a limited subset of IGHV genes, progressing to a highly polyclonal response of B cells with broader IGHV gene usage and extensive class switching to IgG and IgA subclasses with limited somatic hypermutation in the initial weeks of infection. We identify convergence of antibody sequences across SARS-CoV-2-infected patients, highlighting stereotyped naive responses to this virus. Notably, sequence-based detection in COVID-19 patients of convergent B cell clonotypes previously reported in SARS-CoV infection predicts the presence of SARS-CoV/SARS-CoV-2 cross-reactive antibody titers specific for the receptor-binding domain. These findings offer molecular insights into shared features of human B cell responses to SARS-CoV-2 and SARS-CoV.

Identifiants

pubmed: 32941787
pii: S1931-3128(20)30503-5
doi: 10.1016/j.chom.2020.09.002
pmc: PMC7470783
mid: NIHMS1627763
pii:
doi:

Substances chimiques

Antibodies, Viral 0
Immunoglobulin A 0
Immunoglobulin G 0
Spike Glycoprotein, Coronavirus 0
spike protein, SARS-CoV-2 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

516-525.e5

Subventions

Organisme : NHGRI NIH HHS
ID : RM1 HG007735
Pays : United States
Organisme : NCI NIH HHS
ID : U54 CA260517
Pays : United States
Organisme : NIDA NIH HHS
ID : DP1 DA046089
Pays : United States
Organisme : NCI NIH HHS
ID : K08 CA230188
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI127877
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI111825
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI130398
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI057229
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI125567
Pays : United States

Commentaires et corrections

Type : UpdateOf
Type : UpdateOf
Type : CommentIn

Informations de copyright

Copyright © 2020 Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Interests A.T.S. is a scientific founder of Immunai and receives research funding from Arsenal Biosciences not related to this study. M.H. is an employee of ATUM. S.D.B. has consulted for Regeneron, Sanofi, and Novartis on topics unrelated to this study. S.D.B., K.R., P.S.K., and A.E.P. have filed provisional patent applications related to serological tests for SARS-CoV-2 antibodies. K.C.N. reports grants from National Institute of Allergy and Infectious Diseases (NIAID), Food Allergy Research & Education (FARE), and End Allergies Together (EAT); National Heart, Lung, and Blood Institute (NHLBI), and National Institute of Environmental Health Sciences (NIEHS), and is the director of FARE and World Allergy Organization (WAO) Center of Excellence at Stanford; advisor at Cour Pharma; co-founder of Before Brands, Alladapt, Latitude, and IgGenix; National Scientific Committee member at Immune Tolerance Network (ITN) and National Institutes of Health (NIH); a recipient of a Research Sponsorship from Nestle; Consultant and Advisory Board Member at Before Brands, Alladapt, Iggenix, NHLBI, and Probio; Data and Safety Monitoring Board member at NHLBI; and has US patents for basophil testing, multifood immunotherapy and prevention, monoclonal antibodies from plasmablasts, and devices for diagnostics. The remaining authors declare that they have no competing interests.

Références

Cell Rep Med. 2020 Jun 23;1(3):100040
pubmed: 32835303
Nature. 2020 Aug;584(7819):120-124
pubmed: 32454512
Cell. 2020 Jul 9;182(1):73-84.e16
pubmed: 32425270
Cell Rep. 2020 Mar 3;30(9):2963-2977.e6
pubmed: 32130900
Genome Med. 2016 Feb 25;8(1):23
pubmed: 26917418
Curr Protoc Microbiol. 2020 Jun;57(1):e100
pubmed: 32302069
J Immunol. 2019 Oct 1;203(7):1687-1692
pubmed: 31484734
Science. 2020 Jun 12;368(6496):1274-1278
pubmed: 32404477
Trends Microbiol. 2016 Jun;24(6):490-502
pubmed: 27012512
Nucleic Acids Res. 2013 Jul;41(Web Server issue):W34-40
pubmed: 23671333
Sci Rep. 2016 Feb 16;6:20842
pubmed: 26880249
Virology. 2007 Apr 25;361(1):93-102
pubmed: 17161858
Bioinformatics. 2012 Dec 1;28(23):3150-2
pubmed: 23060610
Nature. 2020 Aug;584(7821):437-442
pubmed: 32555388
Science. 2020 Aug 28;369(6507):1119-1123
pubmed: 32661058
Nature. 2020 Jul;583(7815):290-295
pubmed: 32422645
Euro Surveill. 2020 Jan;25(3):
pubmed: 31992387
N Engl J Med. 2020 Feb 20;382(8):727-733
pubmed: 31978945
JAMA. 2020 May 19;323(19):1967-1969
pubmed: 32250394
Cell Host Microbe. 2014 Jul 9;16(1):105-14
pubmed: 24981332
Nucleic Acids Res. 2002 Jan 15;30(2):E9
pubmed: 11788735
N Engl J Med. 2012 Nov 8;367(19):1814-20
pubmed: 23075143
Cell Host Microbe. 2013 Jun 12;13(6):691-700
pubmed: 23768493
Cell. 2019 May 30;177(6):1566-1582.e17
pubmed: 31104840
Leukemia. 2003 Dec;17(12):2257-317
pubmed: 14671650
Sci Rep. 2019 May 15;9(1):7429
pubmed: 31092835
PLoS Med. 2006 Jul;3(7):e237
pubmed: 16796401
Nature. 2020 Aug;584(7819):115-119
pubmed: 32454513
Bioinformatics. 2011 Nov 1;27(21):2957-63
pubmed: 21903629
EBioMedicine. 2016 Oct;12:178-188
pubmed: 27628668
Nat Commun. 2020 Aug 27;11(1):4303
pubmed: 32855401
Lancet. 2020 Feb 15;395(10223):497-506
pubmed: 31986264
Sci Transl Med. 2019 Feb 27;11(481):
pubmed: 30814336
Lancet. 2003 Apr 19;361(9366):1319-25
pubmed: 12711465

Auteurs

Sandra C A Nielsen (SCA)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Fan Yang (F)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Katherine J L Jackson (KJL)

Garvan Institute of Medical Research, Darlinghurst, NSW 2010, Australia.

Ramona A Hoh (RA)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Katharina Röltgen (K)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Grace H Jean (GH)

Department of Developmental Biology, Stanford University, Stanford, CA 94305, USA.

Bryan A Stevens (BA)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Ji-Yeun Lee (JY)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Arjun Rustagi (A)

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University, Stanford, CA 94305, USA.

Angela J Rogers (AJ)

Department of Medicine, Division of Pulmonary, Allergy and Critical Care Medicine, Stanford University, Stanford, CA 94305, USA.

Abigail E Powell (AE)

Stanford ChEM-H and Department of Biochemistry, Stanford University, Stanford, CA 94305, USA.

Molly Hunter (M)

ATUM, Newark, CA, 94560, USA.

Javaria Najeeb (J)

Department of Structural Biology, Stanford University, Stanford, CA 94305, USA.

Ana R Otrelo-Cardoso (AR)

Department of Structural Biology, Stanford University, Stanford, CA 94305, USA.

Kathryn E Yost (KE)

Center for Personal Dynamic Regulomes, Stanford University, Stanford, CA 94305, USA.

Bence Daniel (B)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Kari C Nadeau (KC)

Department of Medicine, Division of Pulmonary, Allergy and Critical Care Medicine, Stanford University, Stanford, CA 94305, USA; Sean N. Parker Center for Allergy and Asthma Research, Stanford University School of Medicine, Stanford, CA, 94305, USA.

Howard Y Chang (HY)

Center for Personal Dynamic Regulomes, Stanford University, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA.

Ansuman T Satpathy (AT)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Theodore S Jardetzky (TS)

Department of Structural Biology, Stanford University, Stanford, CA 94305, USA; Sean N. Parker Center for Allergy and Asthma Research, Stanford University School of Medicine, Stanford, CA, 94305, USA.

Peter S Kim (PS)

Stanford ChEM-H and Department of Biochemistry, Stanford University, Stanford, CA 94305, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.

Taia T Wang (TT)

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University, Stanford, CA 94305, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA; Department of Microbiology and Immunology, Stanford University, Stanford, CA 94305, USA.

Benjamin A Pinsky (BA)

Department of Pathology, Stanford University, Stanford, CA 94305, USA.

Catherine A Blish (CA)

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University, Stanford, CA 94305, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA. Electronic address: cblish@stanford.edu.

Scott D Boyd (SD)

Department of Pathology, Stanford University, Stanford, CA 94305, USA; Sean N. Parker Center for Allergy and Asthma Research, Stanford University School of Medicine, Stanford, CA, 94305, USA. Electronic address: sboyd1@stanford.edu.

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Classifications MeSH