Rapid incorporation of Favipiravir by the fast and permissive viral RNA polymerase complex results in SARS-CoV-2 lethal mutagenesis.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
17 09 2020
Historique:
received: 25 06 2020
accepted: 10 08 2020
entrez: 18 9 2020
pubmed: 19 9 2020
medline: 2 10 2020
Statut: epublish

Résumé

The ongoing Corona Virus Disease 2019 (COVID-19) pandemic, caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), has emphasized the urgent need for antiviral therapeutics. The viral RNA-dependent-RNA-polymerase (RdRp) is a promising target with polymerase inhibitors successfully used for the treatment of several viral diseases. We demonstrate here that Favipiravir predominantly exerts an antiviral effect through lethal mutagenesis. The SARS-CoV RdRp complex is at least 10-fold more active than any other viral RdRp known. It possesses both unusually high nucleotide incorporation rates and high-error rates allowing facile insertion of Favipiravir into viral RNA, provoking C-to-U and G-to-A transitions in the already low cytosine content SARS-CoV-2 genome. The coronavirus RdRp complex represents an Achilles heel for SARS-CoV, supporting nucleoside analogues as promising candidates for the treatment of COVID-19.

Identifiants

pubmed: 32943628
doi: 10.1038/s41467-020-18463-z
pii: 10.1038/s41467-020-18463-z
pmc: PMC7499305
doi:

Substances chimiques

Amides 0
Antiviral Agents 0
Pyrazines 0
RNA, Viral 0
T 1105 0
Viral Nonstructural Proteins 0
Coronavirus RNA-Dependent RNA Polymerase EC 2.7.7.48
NSP12 protein, SARS-CoV-2 EC 2.7.7.48
RNA-Dependent RNA Polymerase EC 2.7.7.48
favipiravir EW5GL2X7E0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

4682

Subventions

Organisme : NIAID NIH HHS
ID : R01 AI059130
Pays : United States
Organisme : NIAID NIH HHS
ID : R37 AI059130
Pays : United States
Organisme : NIAID NIH HHS
ID : R56 AI059130
Pays : United States

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Auteurs

Ashleigh Shannon (A)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France.

Barbara Selisko (B)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France.

Nhung-Thi-Tuyet Le (NT)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France.

Johanna Huchting (J)

Faculty of Sciences, Department of Chemistry, Organic Chemistry, University of Hamburg, Martin-Luther-King-Platz 6, D-20146, Hamburg, Germany.

Franck Touret (F)

Unité des Virus Émergents (UVE: Aix-Marseille Univ - IRD 190 - Inserm 1207 - IHU Méditerranée Infection), Marseille, France.

Géraldine Piorkowski (G)

Unité des Virus Émergents (UVE: Aix-Marseille Univ - IRD 190 - Inserm 1207 - IHU Méditerranée Infection), Marseille, France.

Véronique Fattorini (V)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France.

François Ferron (F)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France.

Etienne Decroly (E)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France.

Chris Meier (C)

Faculty of Sciences, Department of Chemistry, Organic Chemistry, University of Hamburg, Martin-Luther-King-Platz 6, D-20146, Hamburg, Germany.

Bruno Coutard (B)

Unité des Virus Émergents (UVE: Aix-Marseille Univ - IRD 190 - Inserm 1207 - IHU Méditerranée Infection), Marseille, France.

Olve Peersen (O)

Department of Biochemistry & Molecular Biology, Colorado State University, Fort Collins, CO, 80523-1870, USA. Olve.Peersen@colostate.edu.

Bruno Canard (B)

Architecture et Fonction des Macromolécules Biologiques, CNRS and Aix-Marseille Université, UMR 7257, 13009, Marseille, France. bruno.canard@afmb.univ-mrs.fr.

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