Diatom modulation of select bacteria through use of two unique secondary metabolites.

Animals Bacteria / genetics Cinnamates / metabolism Depsides / metabolism Diatoms / genetics Dicarboxylic Acids / metabolism Gene Expression Profiling Metabolomics Metagenome Metagenomics Microbiota / physiology Oceans and Seas Phytoplankton / genetics Secondary Metabolism / physiology Water Microbiology Rosmarinic Acid
diatoms microbiomes phycosphere phytoplankton–bacteria interactions secondary metabolism

Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
03 11 2020
Historique:
pubmed: 18 10 2020
medline: 8 1 2021
entrez: 17 10 2020
Statut: ppublish

Résumé

Unicellular eukaryotic phytoplankton, such as diatoms, rely on microbial communities for survival despite lacking specialized compartments to house microbiomes (e.g., animal gut). Microbial communities have been widely shown to benefit from diatom excretions that accumulate within the microenvironment surrounding phytoplankton cells, known as the phycosphere. However, mechanisms that enable diatoms and other unicellular eukaryotes to nurture specific microbiomes by fostering beneficial bacteria and repelling harmful ones are mostly unknown. We hypothesized that diatom exudates may tune microbial communities and employed an integrated multiomics approach using the ubiquitous diatom

Identifiants

DOI: 10.1073/pnas.2012088117 PMID: 33067398 PMC: PMC7959551
pubmed: 33067398
pii: 2012088117
doi: 10.1073/pnas.2012088117
pmc: PMC7959551
doi:

Substances chimiques

Cinnamates 0
Depsides 0
Dicarboxylic Acids 0
azelaic acid F2VW3D43YT

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

27445-27455

Informations de copyright

Copyright © 2020 the Author(s). Published by PNAS.

Déclaration de conflit d'intérêts

The authors declare no competing interest.

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Auteurs

Ahmed A Shibl (AA)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.
ORCID: 0000-0002-8147-8406

Ashley Isaac (A)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.
International Max Planck Research School of Marine Microbiology, University of Bremen, Bremen 28334, Germany.
ORCID: 0000-0001-9859-4190

Michael A Ochsenkühn (MA)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.
ORCID: 0000-0003-0878-1756

Anny Cárdenas (A)

Department of Biology, University of Konstanz, Konstanz 78467, Germany.
Red Sea Research Center, Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia.

Cong Fei (C)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.

Gregory Behringer (G)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.

Marc Arnoux (M)

Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.
ORCID: 0000-0001-9387-8071

Nizar Drou (N)

Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.

Miraflor P Santos (MP)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.

Kristin C Gunsalus (KC)

Center for Genomics and Systems Biology, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates.
Center for Genomics and Systems Biology, Department of Biology, New York University, New York, NY 10003.
ORCID: 0000-0001-9769-4624

Christian R Voolstra (CR)

Department of Biology, University of Konstanz, Konstanz 78467, Germany.
Red Sea Research Center, Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia.
ORCID: 0000-0003-4555-3795

Shady A Amin (SA)

Marine Microbial Ecology Laboratory, Biology Program, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates; samin@nyu.edu.
ORCID: 0000-0003-3780-8102

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Classifications MeSH

questionsmedicales.fr › Eucaryotes › Animaux › Diatom modulation of select bacteria through...
questionsmedicales.fr › Bactéries › Diatom modulation of select bacteria through...
questionsmedicales.fr › Composés chimiques organiques › Acides carboxyliques › Acides carbocycliques › Cinnamates › Diatom modulation of select bacteria through...
questionsmedicales.fr › Composés chimiques organiques › Hydrocarbures › Hydrocarbures cycliques › Hydrocarbures aromatiques › Dérivés du benzène › Phénols › Hydroxybenzoates › Depsides › Diatom modulation of select bacteria through...
questionsmedicales.fr › Eucaryotes › Straménopiles › Diatomées › Diatom modulation of select bacteria through...
questionsmedicales.fr › Composés chimiques organiques › Acides carboxyliques › Acides acycliques › Diacides carboxyliques › Diatom modulation of select bacteria through...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de profil d'expression de gènes › Diatom modulation of select bacteria through...
questionsmedicales.fr › Disciplines des sciences naturelles › Chimie › Biochimie › Métabolomique › Diatom modulation of select bacteria through...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Métagénome › Diatom modulation of select bacteria through...
questionsmedicales.fr › Disciplines des sciences naturelles › Disciplines des sciences biologiques › Biologie › Génétique › Génomique › Métagénomique › Diatom modulation of select bacteria through...
questionsmedicales.fr › Environnement et santé publique › Environnement › Écosystème › Biodiversité › Biote › Microbiote › Diatom modulation of select bacteria through...
questionsmedicales.fr › Régions géographiques › Océans et mers › Diatom modulation of select bacteria through...
questionsmedicales.fr › Stades d'organismes › Plancton › Phytoplancton › Diatom modulation of select bacteria through...
questionsmedicales.fr › Métabolisme › Voies et réseaux métaboliques › Métabolisme secondaire › Diatom modulation of select bacteria through...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Microbiologie de l'environnement › Microbiologie de l'eau › Diatom modulation of select bacteria through...