Metapopulation ecology links antibiotic resistance, consumption, and patient transfers in a network of hospital wards.

E. coli Enterobacter cloacae Klebsiella pneumoniae MRSA antibiotic stewardship antimicrobial resistance ecology infection control infectious disease microbiology

Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
27 10 2020
Historique:
received: 30 12 2019
accepted: 12 10 2020
pubmed: 28 10 2020
medline: 17 3 2021
entrez: 27 10 2020
Statut: epublish

Résumé

Antimicrobial resistance (AMR) is a global threat. A better understanding of how antibiotic use and between-ward patient transfers (or connectivity) impact population-level AMR in hospital networks can help optimize antibiotic stewardship and infection control strategies. Here, we used a metapopulation framework to explain variations in the incidence of infections caused by seven major bacterial species and their drug-resistant variants in a network of 357 hospital wards. We found that ward-level antibiotic consumption volume had a stronger influence on the incidence of the more resistant pathogens, while connectivity had the most influence on hospital-endemic species and carbapenem-resistant pathogens. Piperacillin-tazobactam consumption was the strongest predictor of the cumulative incidence of infections resistant to empirical sepsis therapy. Our data provide evidence that both antibiotic use and connectivity measurably influence hospital AMR. Finally, we provide a ranking of key antibiotics by their estimated population-level impact on AMR that might help inform antimicrobial stewardship strategies.

Identifiants

pubmed: 33106223
doi: 10.7554/eLife.54795
pii: 54795
pmc: PMC7690951
doi:
pii:

Substances chimiques

Anti-Bacterial Agents 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Fondation Innovations en Infectiologie
ID : R18037CC
Pays : International
Organisme : French Laboratory of Excellence project ECOFECT
ID : ANR-11-LABX-0048
Pays : International

Commentaires et corrections

Type : CommentIn

Informations de copyright

© 2020, Shapiro et al.

Déclaration de conflit d'intérêts

JS, GL, AM, PG, AL, MM, JS, BL, OD, FL, GL, CC, SC, FV, JF, JR No competing interests declared

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Auteurs

Julie Teresa Shapiro (JT)

CIRI, Centre International de Recherche en Infectiologie, Université de Lyon, Inserm U1111, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, UMR5308, Lyon, France.

Gilles Leboucher (G)

Département de Pharmacie, Hospices Civils de Lyon, Lyon, France.

Anne-Florence Myard-Dury (AF)

Pôle de Santé Publique, Département d'Information Médicale, Hospices Civils de Lyon, Lyon, France.

Pascale Girardo (P)

Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Anatole Luzzati (A)

Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Mélissa Mary (M)

Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Jean-François Sauzon (JF)

Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Bénédicte Lafay (B)

Laboratoire de Biométrie et Biologie Evolutive, UMR CNRS 5558, University of Lyon, Lyon, France.

Olivier Dauwalder (O)

Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Frédéric Laurent (F)

CIRI, Centre International de Recherche en Infectiologie, Université de Lyon, Inserm U1111, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, UMR5308, Lyon, France.
Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Gerard Lina (G)

CIRI, Centre International de Recherche en Infectiologie, Université de Lyon, Inserm U1111, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, UMR5308, Lyon, France.
Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Christian Chidiac (C)

Service des Maladies Infectieuses et Tropicales, Hospices Civils de Lyon, Lyon, France.

Sandrine Couray-Targe (S)

Pôle de Santé Publique, Département d'Information Médicale, Hospices Civils de Lyon, Lyon, France.

François Vandenesch (F)

CIRI, Centre International de Recherche en Infectiologie, Université de Lyon, Inserm U1111, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, UMR5308, Lyon, France.
Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

Jean-Pierre Flandrois (JP)

Laboratoire de Biométrie et Biologie Evolutive, UMR CNRS 5558, University of Lyon, Lyon, France.

Jean-Philippe Rasigade (JP)

CIRI, Centre International de Recherche en Infectiologie, Université de Lyon, Inserm U1111, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, UMR5308, Lyon, France.
Institut des Agents Infectieux, Hospices Civils de Lyon, Lyon, France.

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