The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities.
Journal
Nucleic acids research
ISSN: 1362-4962
Titre abrégé: Nucleic Acids Res
Pays: England
ID NLM: 0411011
Informations de publication
Date de publication:
08 01 2021
08 01 2021
Historique:
accepted:
07
10
2020
revised:
04
10
2020
received:
09
09
2020
pubmed:
30
10
2020
medline:
27
1
2021
entrez:
29
10
2020
Statut:
ppublish
Résumé
The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img.jgi.doe.gov/m/) contains annotated isolate genome and metagenome datasets sequenced at the DOE's Joint Genome Institute (JGI), submitted by external users, or imported from public sources such as NCBI. IMG v 6.0 includes advanced search functions and a new tool for statistical analysis of mixed sets of genomes and metagenome bins. The new IMG web user interface also has a new Help page with additional documentation and webinar tutorials to help users better understand how to use various IMG functions and tools for their research. New datasets have been processed with the prokaryotic annotation pipeline v.5, which includes extended protein family assignments.
Identifiants
pubmed: 33119741
pii: 5943189
doi: 10.1093/nar/gkaa939
pmc: PMC7778900
doi:
Substances chimiques
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
D751-D763Informations de copyright
Published by Oxford University Press on behalf of Nucleic Acids Research 2020.
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