Stereo-electronic control of reaction selectivity in short-chain dehydrogenases: Decarboxylation, epimerization, and dehydration.
Decarboxylase
Dehydratase
Epimerase
SDR
Short-chain dehydrogenase/reductase
Stereo-electronic effect
Transient oxidation-reduction
Journal
Current opinion in chemical biology
ISSN: 1879-0402
Titre abrégé: Curr Opin Chem Biol
Pays: England
ID NLM: 9811312
Informations de publication
Date de publication:
04 2021
04 2021
Historique:
received:
15
08
2020
revised:
18
09
2020
accepted:
27
09
2020
pubmed:
10
11
2020
medline:
15
9
2021
entrez:
9
11
2020
Statut:
ppublish
Résumé
Sugar nucleotide-modifying enzymes of the short-chain dehydrogenase/reductase type use transient oxidation-reduction by a tightly bound nicotinamide cofactor as a common strategy of catalysis to promote a diverse set of reactions, including decarboxylation, single- or double-site epimerization, and dehydration. Although the basic mechanistic principles have been worked out decades ago, the finely tuned control of reactivity and selectivity in several of these enzymes remains enigmatic. Recent evidence on uridine 5'-diphosphate (UDP)-glucuronic acid decarboxylases (UDP-xylose synthase, UDP-apiose/UDP-xylose synthase) and UDP-glucuronic acid-4-epimerase suggests that stereo-electronic constraints established at the enzyme's active site control the selectivity, and the timing of the catalytic reaction steps, in the conversion of the common substrate toward different products. The mechanistic idea of stereo-electronic control is extended to epimerases and dehydratases that deprotonate the Cα of the transient keto-hexose intermediate. The human guanosine 5'-diphosphate (GDP)-mannose 4,6-dehydratase was recently shown to use a minimal catalytic machinery, exactly as predicted earlier from theoretical considerations, for the β-elimination of water from the keto-hexose species.
Identifiants
pubmed: 33166830
pii: S1367-5931(20)30132-0
doi: 10.1016/j.cbpa.2020.09.010
pii:
doi:
Substances chimiques
Carboxylic Acids
0
Water
059QF0KO0R
Short Chain Dehydrogenase-Reductases
EC 1.1.1.-
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
43-52Subventions
Organisme : Austrian Science Fund FWF
ID : I 3247
Pays : Austria
Informations de copyright
Copyright © 2020 The Author(s). Published by Elsevier Ltd.. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of competing interest Nothing declared.