Genome-wide assessment of diversity and differentiation between original and modern Brown cattle populations.
FST
candidate genes
genetic diversity
runs of homozygosity
Journal
Animal genetics
ISSN: 1365-2052
Titre abrégé: Anim Genet
Pays: England
ID NLM: 8605704
Informations de publication
Date de publication:
Feb 2021
Feb 2021
Historique:
accepted:
08
10
2020
pubmed:
12
11
2020
medline:
22
6
2021
entrez:
11
11
2020
Statut:
ppublish
Résumé
Identifying genomic regions involved in the differences between breeds can provide information on genes that are under the influence of both artificial and natural selection. The aim of this study was to assess the genetic diversity and differentiation among four different Brown cattle populations (two original vs. two modern populations) and to characterize the distribution of runs of homozygosity (ROH) islands using the Illumina Bovine SNP50 BeadChip genotyping data. After quality control, 34 735 SNPs and 106 animals were retained for the analyses. Larger heterogeneity was highlighted for the original populations. Patterns of genetic differentiation, multidimensional scaling, and the neighboring joining tree distinguished the modern from the original populations. The F
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
21-31Informations de copyright
© 2020 Stichting International Foundation for Animal Genetics.
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