Structural insights into loss of function of a pore forming toxin and its role in pneumococcal adaptation to an intracellular lifestyle.


Journal

PLoS pathogens
ISSN: 1553-7374
Titre abrégé: PLoS Pathog
Pays: United States
ID NLM: 101238921

Informations de publication

Date de publication:
11 2020
Historique:
received: 17 06 2020
accepted: 24 09 2020
revised: 04 12 2020
pubmed: 21 11 2020
medline: 9 2 2021
entrez: 20 11 2020
Statut: epublish

Résumé

The opportunistic pathogen Streptococcus pneumoniae has dual lifestyles: one of an asymptomatic colonizer in the human nasopharynx and the other of a deadly pathogen invading sterile host compartments. The latter triggers an overwhelming inflammatory response, partly driven via pore forming activity of the cholesterol dependent cytolysin (CDC), pneumolysin. Although pneumolysin-induced inflammation drives person-to-person transmission from nasopharynx, the primary reservoir for pneumococcus, it also contributes to high mortality rates, creating a bottleneck that hampers widespread bacterial dissemination, thus acting as a double-edged sword. Serotype 1 ST306, a widespread pneumococcal clone, harbours a non-hemolytic variant of pneumolysin (Ply-NH). Performing crystal structure analysis of Ply-NH, we identified Y150H and T172I as key substitutions responsible for loss of its pore forming activity. We uncovered a novel inter-molecular cation-π interaction, governing formation of the transmembrane β-hairpins (TMH) in the pore state of Ply, which can be extended to other CDCs. H150 in Ply-NH disrupts this interaction, while I172 provides structural rigidity to domain-3, through hydrophobic interactions, inhibiting TMH formation. Loss of pore forming activity enabled improved cellular invasion and autophagy evasion, promoting an atypical intracellular lifestyle for pneumococcus, a finding that was corroborated in in vivo infection models. Attenuation of inflammatory responses and tissue damage promoted tolerance of Ply-NH-expressing pneumococcus in the lower respiratory tract. Adoption of this altered lifestyle may be necessary for ST306 due to its limited nasopharyngeal carriage, with Ply-NH, aided partly by loss of its pore forming ability, facilitating a benign association of SPN in an alternative, intracellular host niche.

Identifiants

pubmed: 33216805
doi: 10.1371/journal.ppat.1009016
pii: PPATHOGENS-D-20-01305
pmc: PMC7717573
doi:

Substances chimiques

Bacterial Proteins 0
Streptolysins 0
plY protein, Streptococcus pneumoniae 0
Perforin 126465-35-8
Cholesterol 97C5T2UQ7J

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1009016

Subventions

Organisme : Wellcome Trust
ID : 204457/Z/16/Z
Pays : United Kingdom

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

Elife. 2017 Mar 21;6:
pubmed: 28323617
Nat Microbiol. 2019 Jan;4(1):62-70
pubmed: 30420782
PLoS One. 2013;8(4):e61300
pubmed: 23577214
Q Rev Biol. 1996 Mar;71(1):37-78
pubmed: 8919665
J Med Microbiol. 2010 Jul;59(Pt 7):808-814
pubmed: 20339017
Biochim Biophys Acta Mol Cell Biol Lipids. 2018 Aug;1863(8):795-805
pubmed: 29679741
PLoS One. 2014 Aug 08;9(8):e103625
pubmed: 25105894
Future Microbiol. 2012 Jan;7(1):33-46
pubmed: 22191445
Clin Microbiol Rev. 2015 Jul;28(3):871-99
pubmed: 26085553
J Biol Chem. 2014 Jun 6;289(23):15942-50
pubmed: 24790078
Cell Host Microbe. 2017 Jan 11;21(1):73-83
pubmed: 28081446
mBio. 2011 May 24;2(3):e00092-11
pubmed: 21610120
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67
pubmed: 21460454
Nature. 1985 Sep 12-18;317(6033):106
pubmed: 4033793
J Infect Dis. 2004 Mar 1;189(5):785-96
pubmed: 14976594
Infect Immun. 2005 Aug;73(8):4653-67
pubmed: 16040978
mBio. 2020 May 19;11(3):
pubmed: 32430472
Cell. 1997 May 30;89(5):685-92
pubmed: 9182756
J Infect Dis. 2007 Sep 15;196(6):936-44
pubmed: 17703426
PLoS One. 2015 Aug 07;10(8):e0134055
pubmed: 26252211
PLoS Pathog. 2010 Nov 11;6(11):e1001191
pubmed: 21085613
J Biol Chem. 2009 May 22;284(21):14645-56
pubmed: 19307185
Sci Rep. 2015 Sep 03;5:13293
pubmed: 26333773
Clin Infect Dis. 2006 Feb 15;42(4):451-9
pubmed: 16421787
Comput Struct Biotechnol J. 2015 Apr 08;13:241-7
pubmed: 25904996
Nat Rev Microbiol. 2008 Nov;6(11):827-37
pubmed: 18923410
PLoS One. 2015 Aug 28;10(8):e0137108
pubmed: 26317436
mBio. 2012 Sep 25;3(5):
pubmed: 23015736
PLoS Pathog. 2013;9(6):e1003394
pubmed: 23762025
Nat Microbiol. 2018 May;3(5):600-610
pubmed: 29662129
Curr Opin Immunol. 2018 Feb;50:88-93
pubmed: 29253642
Nat Commun. 2019 Jul 16;10(1):3060
pubmed: 31311921
Nature. 2012 Jan 15;482(7385):414-8
pubmed: 22246324
Nat Rev Microbiol. 2018 Jun;16(6):355-367
pubmed: 29599457
Nucleic Acids Res. 2003 Jul 1;31(13):3381-5
pubmed: 12824332
J Immunol. 2008 May 1;180(9):6246-54
pubmed: 18424747
Pharm Res. 2014 Jan;31(1):97-103
pubmed: 23881305
PLoS One. 2015 Mar 23;10(3):e0119823
pubmed: 25798590
Infect Immun. 2017 Dec 19;86(1):
pubmed: 29061707
Cell. 2017 Jan 26;168(3):503-516.e12
pubmed: 28129542
J Biol Chem. 2002 Mar 29;277(13):11597-605
pubmed: 11799121
J Clin Microbiol. 2006 Jan;44(1):151-9
pubmed: 16390963
J Struct Biol. 2016 Feb;193(2):132-40
pubmed: 26688057
PLoS Pathog. 2018 Oct 31;14(10):e1007396
pubmed: 30379943
Biochim Biophys Acta. 2016 Nov;1860(11 Pt A):2498-2509
pubmed: 27481675
mBio. 2016 Nov 15;7(6):
pubmed: 27935839
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
pubmed: 15572765
Infect Immun. 2014 Aug;82(8):3289-98
pubmed: 24866797
J Infect Dis. 2005 Sep 1;192(5):791-800
pubmed: 16088828
Biochem Biophys Res Commun. 2008 Apr 11;368(3):786-92
pubmed: 18261465
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21
pubmed: 20124702
J Clin Microbiol. 2003 Nov;41(11):4966-70
pubmed: 14605125
Cell Death Differ. 2017 May;24(5):917-928
pubmed: 28387756
J Bacteriol. 2015 Mar;197(5):807-18
pubmed: 25512311
Methods Enzymol. 1974;31:172-80
pubmed: 4370662
PLoS Pathog. 2018 Jul 16;14(7):e1007168
pubmed: 30011336
Proc Natl Acad Sci U S A. 2003 Feb 18;100(4):1966-71
pubmed: 12569171
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674
pubmed: 19461840
Biochem J. 1998 Feb 1;329 ( Pt 3):571-7
pubmed: 9445384
J Mol Biol. 1968 Apr 28;33(2):491-7
pubmed: 5700707
Cell Rep. 2013 May 30;3(5):1369-77
pubmed: 23665225
Sci Rep. 2015 Sep 25;5:14352
pubmed: 26403197
Clin Infect Dis. 2018 Jun 18;67(1):42-49
pubmed: 29324986
J Bacteriol. 1996 Oct;178(20):6087-90
pubmed: 8830714
Nat Struct Mol Biol. 2004 Aug;11(8):697-705
pubmed: 15235590

Auteurs

Dilip C Badgujar (DC)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Anjali Anil (A)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Angharad E Green (AE)

Department of Clinical Infection, Microbiology and Immunology, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom.

Manalee Vishnu Surve (MV)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Shilpa Madhavan (S)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Alison Beckett (A)

Division of Cellular and Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, United Kingdom.

Ian A Prior (IA)

Division of Cellular and Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool, United Kingdom.

Barsa K Godsora (BK)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Sanket B Patil (SB)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Prachi Kadam More (PK)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Shruti Guha Sarkar (SG)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Andrea Mitchell (A)

Institute of Microbiology and Infection, College of Medical and Dental Sciences, University of Birmingham, Birmingham, United Kingdom.

Rinti Banerjee (R)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Prashant S Phale (PS)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Timothy J Mitchell (TJ)

Institute of Microbiology and Infection, College of Medical and Dental Sciences, University of Birmingham, Birmingham, United Kingdom.

Daniel R Neill (DR)

Department of Clinical Infection, Microbiology and Immunology, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom.

Prasenjit Bhaumik (P)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Anirban Banerjee (A)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH