Using Deep Learning Artificial Intelligence Algorithms to Verify N-Nitroso-N-Methylurea and Urethane Positive Control Proliferative Changes in Tg-RasH2 Mouse Carcinogenicity Studies.

Tg-rasH2 artificial intelligence carcinogenicity convolutional neural network deep learning safety assessment

Journal

Toxicologic pathology
ISSN: 1533-1601
Titre abrégé: Toxicol Pathol
Pays: United States
ID NLM: 7905907

Informations de publication

Date de publication:
06 2021
Historique:
pubmed: 9 12 2020
medline: 19 8 2021
entrez: 8 12 2020
Statut: ppublish

Résumé

In Tg-rasH2 carcinogenicity mouse models, a positive control group is treated with a carcinogen such as urethane or N-nitroso-N-methylurea to test study validity based on the presence of the expected proliferative lesions in the transgenic mice. We hypothesized that artificial intelligence-based deep learning (DL) could provide decision support for the toxicologic pathologist by screening for the proliferative changes, verifying the expected pattern for the positive control groups. Whole slide images (WSIs) of the lungs, thymus, and stomach from positive control groups were used for supervised training of a convolutional neural network (CNN). A single pathologist annotated WSIs of normal and abnormal tissue regions for training the CNN-based supervised classifier using INHAND criteria. The algorithm was evaluated using a subset of tissue regions that were not used for training and then additional tissues were evaluated blindly by 2 independent pathologists. A binary output (proliferative classes present or not) from the pathologists was compared to that of the CNN classifier. The CNN model grouped proliferative lesion positive and negative animals at high concordance with the pathologists. This process simulated a workflow for review of these studies, whereby a DL algorithm could provide decision support for the pathologists in a nonclinical study.

Identifiants

pubmed: 33287665
doi: 10.1177/0192623320973986
doi:

Substances chimiques

Carcinogens 0
Methylurea Compounds 0
Urethane 3IN71E75Z5
methylurea VZ89YBW3P8

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

938-949

Auteurs

Daniel Rudmann (D)

129269Charles River Laboratories, Ashland, OH, USA.

Jay Albretsen (J)

537465Charles River Laboratories, Mattawan, MI, USA.

Colin Doolan (C)

Deciphex, Dublin, Ireland.

Mark Gregson (M)

Deciphex, Dublin, Ireland.

Beth Dray (B)

129269Charles River Laboratories, Ashland, OH, USA.

Aaron Sargeant (A)

Charles River Laboratories, Spencerville, OH, USA.

Donal O'Shea D (D)

Deciphex, Dublin, Ireland.

Jogile Kuklyte (J)

Deciphex, Dublin, Ireland.

Adam Power (A)

Deciphex, Dublin, Ireland.

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Classifications MeSH