Structural basis for effector transmembrane domain recognition by type VI secretion system chaperones.


Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
15 12 2020
Historique:
received: 04 09 2020
accepted: 14 12 2020
pubmed: 16 12 2020
medline: 17 3 2021
entrez: 15 12 2020
Statut: epublish

Résumé

Type VI secretion systems (T6SSs) deliver antibacterial effector proteins between neighboring bacteria. Many effectors harbor N-terminal

Identifiants

pubmed: 33320089
doi: 10.7554/eLife.62816
pii: 62816
pmc: PMC7773334
doi:
pii:

Substances chimiques

Membrane Proteins 0
Molecular Chaperones 0
Type VI Secretion Systems 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : CIHR
ID : PJT-156129
Pays : Canada
Organisme : Natural Sciences and Engineering Research Council of Canada
ID : RGPIN-2017-05350
Pays : International
Organisme : Natural Sciences and Engineering Research Council of Canada
ID : RGPIN-2018-04968
Pays : International
Organisme : CIHR
ID : PJT156214
Pays : Canada
Organisme : Canadian Foundation for Innovation
ID : 34531
Pays : International
Organisme : Canadian Foundation for Innovation
ID : 37841
Pays : International

Informations de copyright

© 2020, Ahmad et al.

Déclaration de conflit d'intérêts

SA, KT, KS, DQ, TT, NB, SR, AM, GP, JW No competing interests declared

Références

Nature. 2020 Jul;583(7817):631-637
pubmed: 32641830
Bioinformatics. 2020 Apr 1;36(7):2272-2274
pubmed: 31821414
Acta Crystallogr D Biol Crystallogr. 2001 Jan;57(Pt 1):122-33
pubmed: 11134934
Microbiology (Reading). 2019 Nov;165(11):1203-1218
pubmed: 31380737
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501
pubmed: 20383002
Cell. 2013 Feb 14;152(4):884-94
pubmed: 23415234
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32
pubmed: 20124692
PLoS One. 2010 Mar 10;5(3):e9490
pubmed: 20224823
Bioinformatics. 2006 Jul 1;22(13):1658-9
pubmed: 16731699
Proc Natl Acad Sci U S A. 2016 Jul 5;113(27):E3931-40
pubmed: 27313214
Proc Natl Acad Sci U S A. 2018 Dec 4;115(49):12519-12524
pubmed: 30455305
Mol Cell. 2013 Sep 12;51(5):584-93
pubmed: 23954347
Nat Commun. 2020 Apr 20;11(1):1865
pubmed: 32313027
Nucleic Acids Res. 2016 Jul 8;44(W1):W344-50
pubmed: 27166375
Res Microbiol. 2002 Dec;153(10):639-46
pubmed: 12558182
Proteins. 2002 May 1;47(2):209-18
pubmed: 11933067
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42
pubmed: 21460441
Acta Crystallogr D Struct Biol. 2016 Jan;72(Pt 1):22-33
pubmed: 26894531
J Struct Biol. 2007 Jan;157(1):38-46
pubmed: 16859925
Nat Protoc. 2015 Jun;10(6):845-58
pubmed: 25950237
Nat Cell Biol. 2007 Jul;9(7):797-803
pubmed: 17558395
Science. 2006 Jun 9;312(5779):1526-30
pubmed: 16763151
J Comput Chem. 2004 Oct;25(13):1605-12
pubmed: 15264254
Mol Biol Evol. 2013 Apr;30(4):772-80
pubmed: 23329690
Nat Microbiol. 2018 May;3(5):632-640
pubmed: 29632369
Cell. 2018 Nov 15;175(5):1380-1392.e14
pubmed: 30343895
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):12-21
pubmed: 20057044
Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55
pubmed: 15299926
Nat Microbiol. 2018 Oct;3(10):1142-1152
pubmed: 30177742
Bioinformatics. 2014 May 1;30(9):1236-40
pubmed: 24451626
Nat Microbiol. 2018 Apr;3(4):440-446
pubmed: 29459733
Nucleic Acids Res. 2011 Jun;39(11):4532-52
pubmed: 21306995
Cell Host Microbe. 2020 Aug 12;28(2):313-321.e6
pubmed: 32470328
PLoS Pathog. 2016 Jun 28;12(6):e1005735
pubmed: 27352036
J Vis Exp. 2017 May 16;(123):
pubmed: 28570515
Cell. 2018 Mar 8;172(6):1306-1318
pubmed: 29522749
Curr Protoc Bioinformatics. 2020 Mar;69(1):e96
pubmed: 32162851
J Biol Chem. 2013 Mar 15;288(11):7618-25
pubmed: 23341465
Cell. 2015 Oct 22;163(3):607-19
pubmed: 26456113
Trends Microbiol. 2017 Jan;25(1):8-10
pubmed: 27856117
Nat Protoc. 2015 Nov;10(11):1820-41
pubmed: 26492139
Nature. 2019 Nov;575(7784):674-678
pubmed: 31695193
Nature. 2013 Sep 26;501(7468):547-50
pubmed: 23913273
Mol Microbiol. 2014 May;92(3):529-42
pubmed: 24589350
Nat Commun. 2018 Aug 27;9(1):3467
pubmed: 30150748
Mol Microbiol. 2016 Mar;99(6):1099-118
pubmed: 26714038
J Mol Biol. 2003 Aug 1;331(1):255-62
pubmed: 12875850
Cell Host Microbe. 2010 Jan 21;7(1):25-37
pubmed: 20114026
Nat Commun. 2019 Dec 2;10(1):5484
pubmed: 31792213
Structure. 2015 Nov 3;23(11):2022-31
pubmed: 26439768
BMC Bioinformatics. 2010 Aug 18;11:431
pubmed: 20718988
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21
pubmed: 20124702
J Mol Biol. 2001 Jan 19;305(3):567-80
pubmed: 11152613
Bioinformatics. 2009 Aug 1;25(15):1972-3
pubmed: 19505945
J Biol Chem. 2018 Feb 2;293(5):1504-1514
pubmed: 29237732
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W429-32
pubmed: 17483518
J Mol Biol. 2018 Sep 14;430(18 Pt B):3143-3156
pubmed: 30031895
Dev Cell. 2004 Nov;7(5):745-54
pubmed: 15525535
Nature. 2013 Aug 15;500(7462):350-353
pubmed: 23925114
Nat Commun. 2019 Aug 9;10(1):3595
pubmed: 31399579
Nature. 2011 Jul 20;475(7356):343-7
pubmed: 21776080
Commun Biol. 2019 Jun 19;2:218
pubmed: 31240256
BMC Bioinformatics. 2010 Mar 08;11:119
pubmed: 20211023
J Mol Biol. 2002 Feb 22;316(3):799-805
pubmed: 11866532
Trends Microbiol. 2016 Jan;24(1):51-62
pubmed: 26549582
Proc Natl Acad Sci U S A. 2015 Jul 21;112(29):9106-11
pubmed: 26150500
Structure. 2012 Feb 8;20(2):237-47
pubmed: 22325773
Curr Opin Struct Biol. 2003 Aug;13(4):412-7
pubmed: 12948770
J Bacteriol. 2015 Jul;197(14):2350-60
pubmed: 25939831

Auteurs

Shehryar Ahmad (S)

Michael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Canada.
Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.

Kara K Tsang (KK)

Michael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Canada.
Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.

Kartik Sachar (K)

Department of Microbiology, University of Manitoba, Winnipeg, Canada.

Dennis Quentin (D)

Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany.

Tahmid M Tashin (TM)

Michael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Canada.
Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.

Nathan P Bullen (NP)

Michael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Canada.
Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.

Stefan Raunser (S)

Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany.

Andrew G McArthur (AG)

Michael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Canada.
Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.
David Braley Centre for Antibiotic Discovery, McMaster University, Hamilton, Canada.

Gerd Prehna (G)

Department of Microbiology, University of Manitoba, Winnipeg, Canada.

John C Whitney (JC)

Michael DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Canada.
Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.
David Braley Centre for Antibiotic Discovery, McMaster University, Hamilton, Canada.

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