Novel variants and cellular studies on patients' primary fibroblasts support a role for NEK1 missense variants in ALS pathogenesis.
Adult
Aged
Aged, 80 and over
Amyotrophic Lateral Sclerosis
/ genetics
Cohort Studies
Female
Fibroblasts
Genetic Association Studies
Genetic Predisposition to Disease
Humans
Loss of Function Mutation
/ genetics
Male
Middle Aged
Mutation, Missense
/ genetics
NIMA-Related Kinase 1
/ genetics
Primary Cell Culture
Journal
Human molecular genetics
ISSN: 1460-2083
Titre abrégé: Hum Mol Genet
Pays: England
ID NLM: 9208958
Informations de publication
Date de publication:
25 03 2021
25 03 2021
Historique:
received:
20
11
2020
revised:
04
01
2021
accepted:
06
01
2021
pubmed:
15
1
2021
medline:
5
10
2021
entrez:
14
1
2021
Statut:
ppublish
Résumé
In the last few years, NEK1 has been identified as a new gene related to amyotrophic lateral sclerosis (ALS). Loss-of-function variants have been mostly described, although several missense variants exist, which pathogenic relevance remains to be established. We attempted to determine the contribution of NEK1 gene in an Italian cohort of 531 sporadic and familial amyotrophic lateral sclerosis (ALS) patients applying massive parallel sequencing technologies. We filtered results of NEK1 gene and identified 20 NEK1 rare variants (MAF < 0.01) in 22 patients. In particular, we found two novel frameshift variants (p.Glu929Asnfs*12 and p.Val1030Ilefs*23), 18 missense variants, including the p.Arg261His in three patients, and a novel variant in the start codon, the p.Met1?, which most likely impairs translation initiation. To clarify the role of NEK1 missense variants we investigated NEK1 expression in primary fibroblast cultures. We obtained skin biopsies from four patients with NEK1 variants and we assessed NEK1 expression by western blot and immunofluorescence. We detected a decrease in NEK1 expression in fibroblasts from patients with NEK1 variants, suggesting that missense variants in NEK1 gene may have a pathogenic role. Moreover, we observed additional variants in ALS related genes in seven patients with NEK1 variants (32%), further supporting an oligogenic ALS model.
Identifiants
pubmed: 33445179
pii: 6096935
doi: 10.1093/hmg/ddab015
doi:
Substances chimiques
NEK1 protein, human
EC 2.7.11.1
NIMA-Related Kinase 1
EC 2.7.11.1
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
65-71Informations de copyright
© The Author(s) 2021. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.