Modeling autosomal dominant Alzheimer's disease with machine learning.


Journal

Alzheimer's & dementia : the journal of the Alzheimer's Association
ISSN: 1552-5279
Titre abrégé: Alzheimers Dement
Pays: United States
ID NLM: 101231978

Informations de publication

Date de publication:
06 2021
Historique:
revised: 06 11 2020
received: 06 05 2020
accepted: 08 11 2020
pubmed: 23 1 2021
medline: 16 11 2021
entrez: 22 1 2021
Statut: ppublish

Résumé

Machine learning models were used to discover novel disease trajectories for autosomal dominant Alzheimer's disease. Longitudinal structural magnetic resonance imaging, amyloid positron emission tomography (PET), and fluorodeoxyglucose PET were acquired in 131 mutation carriers and 74 non-carriers from the Dominantly Inherited Alzheimer Network; the groups were matched for age, education, sex, and apolipoprotein ε4 (APOE ε4). A deep neural network was trained to predict disease progression for each modality. Relief algorithms identified the strongest predictors of mutation status. The Relief algorithm identified the caudate, cingulate, and precuneus as the strongest predictors among all modalities. The model yielded accurate results for predicting future Pittsburgh compound B (R Results suggest a sigmoidal trajectory for amyloid, a biphasic response for metabolism, and a gradual decrease in volume, with disease progression primarily in subcortical, middle frontal, and posterior parietal regions.

Identifiants

pubmed: 33480178
doi: 10.1002/alz.12259
pmc: PMC8195816
mid: NIHMS1648082
doi:

Substances chimiques

2-(4'-(methylamino)phenyl)-6-hydroxybenzothiazole 0
Amyloid 0
Aniline Compounds 0
Thiazoles 0
Fluorodeoxyglucose F18 0Z5B2CJX4D

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1005-1016

Subventions

Organisme : NIA NIH HHS
ID : P30 AG066444
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005131
Pays : United States
Organisme : NIA NIH HHS
ID : K01 AG053474
Pays : United States
Organisme : NIA NIH HHS
ID : P01 AG026276
Pays : United States
Organisme : NIA NIH HHS
ID : R01 AG046179
Pays : United States
Organisme : NIA NIH HHS
ID : UF1 AG032438
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR000448
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR002345
Pays : United States
Organisme : NIA NIH HHS
ID : U19 AG032438
Pays : United States
Organisme : NIA NIH HHS
ID : U01 AG042791
Pays : United States
Organisme : NIH HHS
ID : S10 OD018091
Pays : United States
Organisme : NIA NIH HHS
ID : P01 AG003991
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005681
Pays : United States
Organisme : NIA NIH HHS
ID : T32 AG058518
Pays : United States
Organisme : NCRR NIH HHS
ID : S10 RR022984
Pays : United States
Organisme : NIBIB NIH HHS
ID : R01 EB009352
Pays : United States
Organisme : NINDS NIH HHS
ID : P30 NS098577
Pays : United States
Organisme : NIH HHS
ID : S10 OD025214
Pays : United States
Organisme : NIA NIH HHS
ID : R01 AG052550
Pays : United States

Informations de copyright

© 2021 the Alzheimer's Association.

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Auteurs

Patrick H Luckett (PH)

Washington University in St. Louis, St. Louis, Missouri, USA.

Austin McCullough (A)

Washington University in St. Louis, St. Louis, Missouri, USA.

Brian A Gordon (BA)

Washington University in St. Louis, St. Louis, Missouri, USA.

Jeremy Strain (J)

Washington University in St. Louis, St. Louis, Missouri, USA.

Shaney Flores (S)

Washington University in St. Louis, St. Louis, Missouri, USA.

Aylin Dincer (A)

Washington University in St. Louis, St. Louis, Missouri, USA.

John McCarthy (J)

Washington University in St. Louis, St. Louis, Missouri, USA.

Todd Kuffner (T)

Washington University in St. Louis, St. Louis, Missouri, USA.

Ari Stern (A)

Washington University in St. Louis, St. Louis, Missouri, USA.

Karin L Meeker (KL)

Washington University in St. Louis, St. Louis, Missouri, USA.

Sarah B Berman (SB)

University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

Jasmeer P Chhatwal (JP)

Brigham and Women's Hospital, Massachusetts General Hospital, Boston, Massachusetts, USA.

Carlos Cruchaga (C)

Washington University in St. Louis, St. Louis, Missouri, USA.

Anne M Fagan (AM)

Washington University in St. Louis, St. Louis, Missouri, USA.

Martin R Farlow (MR)

Indiana University, Bloomington, Indiana, USA.

Nick C Fox (NC)

Dementia Research Centre, UCL Queen Square Institute of Neurology, London, UK.

Mathias Jucker (M)

German Center for Neurodegenerative Disease, Tübingen, Germany.

Johannes Levin (J)

Ludwig Maximilian University of Munich, Munich, Germany.
German Center for Neurodegenerative Diseases, Munich, Germany.
Munich Cluster for Systems Neurology (SyNergy), Munich, Germany.

Colin L Masters (CL)

Florey Institute, The University of Melbourne, Parkville, VIC, Australia.

Hiroshi Mori (H)

Osaka City University, Sumiyoshi Ward, Osaka, Japan.

James M Noble (JM)

Taub Institute for Research on Alzheimer's Disease and the Aging Brain, G.H. Sergievsky Center and Department of Neurology, Columbia University Irving Medical Center, New York, New York, USA.

Stephen Salloway (S)

Brown University, Providence, Rhode Island, USA.

Peter R Schofield (PR)

Neuroscience Research Australia, Randwick, NSW, Australia.
University of New South Wales, Sydney, NSW, Australia.

Adam M Brickman (AM)

Columbia University, New York, New York, USA.

William S Brooks (WS)

Neuroscience Research Australia, Randwick, NSW, Australia.
University of New South Wales, Sydney, NSW, Australia.

David M Cash (DM)

Dementia Research Centre, UCL Queen Square Institute of Neurology, London, UK.

Michael J Fulham (MJ)

Department of Molecular Imaging, Royal Prince Alfred Hospital, Missenden Road, Camperdown, NSW, Australia.
University of Sydney, Sydney, NSW, Australia.

Bernardino Ghetti (B)

Indiana University, Bloomington, Indiana, USA.

Clifford R Jack (CR)

Mayo Clinic, Rochester, Minnesota, USA.

Jonathan Vöglein (J)

German Center for Neurodegenerative Diseases, Munich, Germany.
Department of Neurology, Ludwig-Maximilians-Universität München, München, Germany.

William Klunk (W)

University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

Robert Koeppe (R)

University of Michigan, Ann Arbor, Michigan, USA.

Hwamee Oh (H)

Brown University, Providence, Rhode Island, USA.

Yi Su (Y)

Banner Alzheimer Institute, Phoenix, Arizona, USA.

Michael Weiner (M)

University of California, La Jolla, California, USA.

Qing Wang (Q)

Washington University in St. Louis, St. Louis, Missouri, USA.

Laura Swisher (L)

Washington University in St. Louis, St. Louis, Missouri, USA.

Dan Marcus (D)

Washington University in St. Louis, St. Louis, Missouri, USA.

Deborah Koudelis (D)

Washington University in St. Louis, St. Louis, Missouri, USA.

Nelly Joseph-Mathurin (N)

Washington University in St. Louis, St. Louis, Missouri, USA.

Lisa Cash (L)

Washington University in St. Louis, St. Louis, Missouri, USA.

Russ Hornbeck (R)

Washington University in St. Louis, St. Louis, Missouri, USA.

Chengjie Xiong (C)

Washington University in St. Louis, St. Louis, Missouri, USA.

Richard J Perrin (RJ)

Washington University in St. Louis, St. Louis, Missouri, USA.

Celeste M Karch (CM)

Washington University in St. Louis, St. Louis, Missouri, USA.

Jason Hassenstab (J)

Washington University in St. Louis, St. Louis, Missouri, USA.

Eric McDade (E)

Washington University in St. Louis, St. Louis, Missouri, USA.

John C Morris (JC)

Washington University in St. Louis, St. Louis, Missouri, USA.

Tammie L S Benzinger (TLS)

Washington University in St. Louis, St. Louis, Missouri, USA.

Randall J Bateman (RJ)

Washington University in St. Louis, St. Louis, Missouri, USA.

Beau M Ances (BM)

Washington University in St. Louis, St. Louis, Missouri, USA.

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