Federated learning improves site performance in multicenter deep learning without data sharing.

deep learning federated learning generalizability privacy prostate

Journal

Journal of the American Medical Informatics Association : JAMIA
ISSN: 1527-974X
Titre abrégé: J Am Med Inform Assoc
Pays: England
ID NLM: 9430800

Informations de publication

Date de publication:
12 06 2021
Historique:
received: 06 07 2020
revised: 30 11 2020
accepted: 23 12 2020
pubmed: 5 2 2021
medline: 25 11 2021
entrez: 4 2 2021
Statut: ppublish

Résumé

To demonstrate enabling multi-institutional training without centralizing or sharing the underlying physical data via federated learning (FL). Deep learning models were trained at each participating institution using local clinical data, and an additional model was trained using FL across all of the institutions. We found that the FL model exhibited superior performance and generalizability to the models trained at single institutions, with an overall performance level that was significantly better than that of any of the institutional models alone when evaluated on held-out test sets from each institution and an outside challenge dataset. The power of FL was successfully demonstrated across 3 academic institutions while avoiding the privacy risk associated with the transfer and pooling of patient data. Federated learning is an effective methodology that merits further study to enable accelerated development of models across institutions, enabling greater generalizability in clinical use.

Identifiants

pubmed: 33537772
pii: 6127556
doi: 10.1093/jamia/ocaa341
pmc: PMC8200268
doi:

Types de publication

Journal Article Multicenter Study Research Support, N.I.H., Extramural Research Support, N.I.H., Intramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1259-1264

Subventions

Organisme : NCI NIH HHS
ID : R21 CA220352
Pays : United States
Organisme : NIGMS NIH HHS
ID : T32 GM008042
Pays : United States
Organisme : Intramural NIH HHS
ID : ZIA CL040015
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA158627
Pays : United States
Organisme : NIBIB NIH HHS
ID : T32 EB016640
Pays : United States
Organisme : NCI NIH HHS
ID : F30 CA210329
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA195505
Pays : United States
Organisme : NCI NIH HHS
ID : HHSN261200800001E
Pays : United States
Organisme : NCI NIH HHS
ID : P50 CA092131
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA016042
Pays : United States

Informations de copyright

© The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association.

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Auteurs

Karthik V Sarma (KV)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.
Department of Bioengineering, University of California, Los Angeles, Los Angeles, California, USA.

Stephanie Harmon (S)

National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.
Clinical Monitoring Research Program Directorate, Frederick National Laboratory for Cancer Research, Frederick, Maryland, USA.

Thomas Sanford (T)

Department of Urology, SUNY Upstate Medical Center, Syracuse, New York, USA.

Holger R Roth (HR)

NVIDIA Corporation, Bethesda, Maryland, USA.

Ziyue Xu (Z)

NVIDIA Corporation, Bethesda, Maryland, USA.

Jesse Tetreault (J)

NVIDIA Corporation, Bethesda, Maryland, USA.

Daguang Xu (D)

NVIDIA Corporation, Bethesda, Maryland, USA.

Mona G Flores (MG)

NVIDIA Corporation, Bethesda, Maryland, USA.

Alex G Raman (AG)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.

Rushikesh Kulkarni (R)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.

Bradford J Wood (BJ)

National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.

Peter L Choyke (PL)

National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.

Alan M Priester (AM)

Department of Bioengineering, University of California, Los Angeles, Los Angeles, California, USA.
Department of Urology, University of California, Los Angeles, Los Angeles, California, USA.

Leonard S Marks (LS)

Department of Urology, University of California, Los Angeles, Los Angeles, California, USA.

Steven S Raman (SS)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.

Dieter Enzmann (D)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.

Baris Turkbey (B)

National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.

William Speier (W)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.

Corey W Arnold (CW)

Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.
Department of Bioengineering, University of California, Los Angeles, Los Angeles, California, USA.
Department of Pathology and Laboratory Medicine University of California, Los Angeles, Los Angeles, California, USA.

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