Increasing aridity shapes beta diversity and the network dynamics of the belowground fungal microbiome associated with Opuntia ficus-indica.

Aridity gradient Fungal network hubs Metabarcoding Opuntia ficus-indica Root-endosphere Soil-rhizosphere

Journal

The Science of the total environment
ISSN: 1879-1026
Titre abrégé: Sci Total Environ
Pays: Netherlands
ID NLM: 0330500

Informations de publication

Date de publication:
15 Jun 2021
Historique:
received: 12 09 2020
revised: 30 12 2020
accepted: 31 12 2020
pubmed: 17 2 2021
medline: 7 4 2021
entrez: 16 2 2021
Statut: ppublish

Résumé

The effects of aridity on soil and water-use efficient (WUE) crop species are relatively well known. However, the understanding of its impacts on the dynamics of below-ground microorganisms associated with plant roots is less well understood. To investigate the influence of increasing aridity on the dynamics of the fungal communities, samples from the root endosphere and rhizosphere associated with the prickly pear cactus trees (Opuntia ficus-indica) growing along the aridity gradient were collected and the internal transcribed spacer (ITS) were sequenced. The diversity and network analyses of fungal taxa were determined along with standard measurements of soil parameters. We found that (i) the fungal community exhibited similar alpha diversity and shared a set of core taxa within the rhizosphere and endosphere, but there was significant beta diversity differences; (ii) the relative abundance of major phyla was higher in the rhizosphere than in the endosphere; (iii) arbuscular endomycorrhizal colonization was highest in the humid climate and decreased under lower-arid, and was negatively correlated with increased concentration of Ca Our findings highlight the importance of gradient analysis-based correlation network as a powerful approach to understand changes in the diversity, the dynamics, and the structure of fungal communities associated with the rhizosphere-endosphere interaction and led to the identification of microbes at each bioclimatic zone that are potentially involved in promoting the survival, protection, and growth of Opuntia trees. The variability of fungal hubs composition depending on plant compartment and bioclimatic zone will give key implications for the application of rhizospheric fungi and endophytes as microbial inoculants in agriculture, as well as in the conservation and restoration of cacti plants in arid and semi-arid lands against the backdrop of climate change. Overall, this study will enhance our understanding of the microbiomes'dynamic of CAM plants in nature.

Identifiants

pubmed: 33592479
pii: S0048-9697(21)00074-7
doi: 10.1016/j.scitotenv.2021.145008
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

145008

Informations de copyright

Copyright © 2021 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Mahmoud Gargouri (M)

Laboratory of Plant Molecular Physiology, Centre of Biotechnology of Borj-Cedria, PB.901, 2050 Hammam-Lif, Tunisia. Electronic address: mahmoud.gargouri@cbbc.rnrt.tn.

Fatma Karray (F)

Laboratory of Environmental Bioprocesses, Centre of Biotechnology of Sfax, BP 1177, 3018 Sfax, Tunisia. Electronic address: fatma.karray@cbs.rnrt.tn.

Asma Chebaane (A)

Laboratory of Plant Molecular Physiology, Centre of Biotechnology of Borj-Cedria, PB.901, 2050 Hammam-Lif, Tunisia.

Najla Mhiri (N)

Laboratory of Environmental Bioprocesses, Centre of Biotechnology of Sfax, BP 1177, 3018 Sfax, Tunisia.

Laila Pamela Partida-Martínez (LP)

Laboratory of Microbial Interactions, Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados (CINVESTAV), 36824 Irapuato, Mexico.

Sami Sayadi (S)

Centre for Sustainable Development, College of Arts and Sciences, Qatar University, Doha 2713, Qatar.

Ahmed Mliki (A)

Laboratory of Plant Molecular Physiology, Centre of Biotechnology of Borj-Cedria, PB.901, 2050 Hammam-Lif, Tunisia.

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Classifications MeSH