EIF3F-related neurodevelopmental disorder: refining the phenotypic and expanding the molecular spectrum.


Journal

Orphanet journal of rare diseases
ISSN: 1750-1172
Titre abrégé: Orphanet J Rare Dis
Pays: England
ID NLM: 101266602

Informations de publication

Date de publication:
18 03 2021
Historique:
received: 10 12 2020
accepted: 15 02 2021
entrez: 19 3 2021
pubmed: 20 3 2021
medline: 22 6 2021
Statut: epublish

Résumé

An identical homozygous missense variant in EIF3F, identified through a large-scale genome-wide sequencing approach, was reported as causative in nine individuals with a neurodevelopmental disorder, characterized by variable intellectual disability, epilepsy, behavioral problems and sensorineural hearing-loss. To refine the phenotypic and molecular spectrum of EIF3F-related neurodevelopmental disorder, we examined independent patients. 21 patients were homozygous and one compound heterozygous for c.694T>G/p.(Phe232Val) in EIF3F. Haplotype analyses in 15 families suggested that c.694T>G/p.(Phe232Val) was a founder variant. All affected individuals had developmental delays including delayed speech development. About half of the affected individuals had behavioral problems, altered muscular tone, hearing loss, and short stature. Moreover, this study suggests that microcephaly, reduced sensitivity to pain, cleft lip/palate, gastrointestinal symptoms and ophthalmological symptoms are part of the phenotypic spectrum. Minor dysmorphic features were observed, although neither the individuals' facial nor general appearance were obviously distinctive. Symptoms in the compound heterozygous individual with an additional truncating variant were at the severe end of the spectrum in regard to motor milestones, speech delay, organic problems and pre- and postnatal growth of body and head, suggesting some genotype-phenotype correlation. Our study refines the phenotypic and expands the molecular spectrum of EIF3F-related syndromic neurodevelopmental disorder.

Sections du résumé

BACKGROUND
An identical homozygous missense variant in EIF3F, identified through a large-scale genome-wide sequencing approach, was reported as causative in nine individuals with a neurodevelopmental disorder, characterized by variable intellectual disability, epilepsy, behavioral problems and sensorineural hearing-loss. To refine the phenotypic and molecular spectrum of EIF3F-related neurodevelopmental disorder, we examined independent patients.
RESULTS
21 patients were homozygous and one compound heterozygous for c.694T>G/p.(Phe232Val) in EIF3F. Haplotype analyses in 15 families suggested that c.694T>G/p.(Phe232Val) was a founder variant. All affected individuals had developmental delays including delayed speech development. About half of the affected individuals had behavioral problems, altered muscular tone, hearing loss, and short stature. Moreover, this study suggests that microcephaly, reduced sensitivity to pain, cleft lip/palate, gastrointestinal symptoms and ophthalmological symptoms are part of the phenotypic spectrum. Minor dysmorphic features were observed, although neither the individuals' facial nor general appearance were obviously distinctive. Symptoms in the compound heterozygous individual with an additional truncating variant were at the severe end of the spectrum in regard to motor milestones, speech delay, organic problems and pre- and postnatal growth of body and head, suggesting some genotype-phenotype correlation.
CONCLUSIONS
Our study refines the phenotypic and expands the molecular spectrum of EIF3F-related syndromic neurodevelopmental disorder.

Identifiants

pubmed: 33736665
doi: 10.1186/s13023-021-01744-1
pii: 10.1186/s13023-021-01744-1
pmc: PMC7977188
doi:

Substances chimiques

EIF3F protein, human 0
Eukaryotic Initiation Factor-3 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

136

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Auteurs

Ulrike Hüffmeier (U)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany. ulrike.hueffmeier@uk-erlangen.de.

Cornelia Kraus (C)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany.

Miriam S Reuter (MS)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany.

Steffen Uebe (S)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany.

Mary-Alice Abbott (MA)

Medical Genetics, Department of Pediatrics, University of Massachusetts Medical School - Baystate, Springfield, MA, USA.

Syed A Ahmed (SA)

Department of Genetics, Southern California Permanente Medical Group, Kaiser Permanente, Riverside, CA, USA.

Kristyn L Rawson (KL)

Department of Genetics, Southern California Permanente Medical Group, Kaiser Permanente, Riverside, CA, USA.

Eileen Barr (E)

Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, 30322, USA.

Hong Li (H)

Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, 30322, USA.

Ange-Line Bruel (AL)

UMR-Inserm 1231 GAD Team, Génétique des Anomalies du développement, Université de Bourgogne Franche-Comté, 21000, Dijon, France.
Laboratoire de Génétique Chromosomique et Moléculaire, UF Innovation en diagnostic génomique des maladies rares, Plateau de Biologie Hospitalo-Universitaire, Centre Hospitalier Universitaire de Dijon, Dijon, France.

Laurence Faivre (L)

UMR-Inserm 1231 GAD Team, Génétique des Anomalies du développement, Université de Bourgogne Franche-Comté, 21000, Dijon, France.
Centre de Génétique, Centre de Référence «Anomalies du Développement et Syndromes Malformatifs» et FHU TRANSLAD, Hôpital D'Enfants, Centre Hospitalier Universitaire de Dijon, Dijon, France.

Frédéric Tran Mau-Them (F)

UMR-Inserm 1231 GAD Team, Génétique des Anomalies du développement, Université de Bourgogne Franche-Comté, 21000, Dijon, France.
Laboratoire de Génétique Chromosomique et Moléculaire, UF Innovation en diagnostic génomique des maladies rares, Plateau de Biologie Hospitalo-Universitaire, Centre Hospitalier Universitaire de Dijon, Dijon, France.

Christina Botti (C)

Division of Medical Genetics, Department of Pediatrics, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ, 08901, USA.

Susan Brooks (S)

Division of Medical Genetics, Department of Pediatrics, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ, 08901, USA.

Kaitlyn Burns (K)

Sanford Health, Sioux Falls, SD, USA.

D Isum Ward (DI)

Sanford Health, Sioux Falls, SD, USA.

Marina Dutra-Clarke (M)

Division of Genetics, Department of Pediatrics, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.

Julian A Martinez-Agosto (JA)

Division of Genetics, Department of Pediatrics, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.
Department of Human Genetics, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.

Hane Lee (H)

Department of Human Genetics, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.
Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.

Stanley F Nelson (SF)

Division of Genetics, Department of Pediatrics, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.
Department of Human Genetics, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.
Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, CA, 90095, USA.

Pia Zacher (P)

Institute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.
Epilepsy Center Kleinwachau, Radeberg, Germany.

Rami Abou Jamra (R)

Institute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.

Chiara Klöckner (C)

Institute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.

Julie McGaughran (J)

Genetic Health Queensland, Royal Brisbane and Woman's Hospital, Brisbane, Australia.
School of Medicine, The University of Queensland, St Lucia, Brisbane, Australia.

Jürgen Kohlhase (J)

Synlab Human Genetics Freiburg, Freiburg, Germany.

Sarah Schuhmann (S)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany.

Ellen Moran (E)

Clinical Genetics, Hassenfeld Children's Hospital at NYU Langone, NYU Langone, Orthopedic Hospital, New York, NY, USA.

John Pappas (J)

Division of Clinical Genetic Services, Department of Pediatrics, NYU Grossman School of Medicine, New York, NY, USA.

Annick Raas-Rothschild (A)

Sackler School of Medicine at Tel Aviv University, Tel Aviv, Israel.
Institute of Rare Diseases, Edmond & Lily Safra Children Hospital, Tel Hashomer, Israel.

Maria J Guillen Sacoto (MJG)

GeneDx, Gaithersburg, MD, 20877, USA.

Lindsay B Henderson (LB)

GeneDx, Gaithersburg, MD, 20877, USA.

Timothy Blake Palculict (TB)

GeneDx, Gaithersburg, MD, 20877, USA.

Sureni V Mullegama (SV)

GeneDx, Gaithersburg, MD, 20877, USA.

Houda Zghal Elloumi (H)

GeneDx, Gaithersburg, MD, 20877, USA.

Adi Reich (A)

GeneDx, Gaithersburg, MD, 20877, USA.

Samantha A Schrier Vergano (SA)

Division of Medical Genetics and Metabolism, Children's Hospital of The King's Daughters, Norfolk, VA, USA.

Erica Wahl (E)

Division of Genetics, UBMD Pediatrics, Buffalo, NY, USA.

André Reis (A)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany.

Christiane Zweier (C)

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Schwabachanlage 10, 91054, Erlangen, Germany.
Department of Human Genetics, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland.

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