Gain-of-function variants in SYK cause immune dysregulation and systemic inflammation in humans and mice.
Adult
Animals
Arthritis
/ genetics
Base Sequence
Bone Marrow Transplantation
Colitis
/ genetics
Dermatitis
/ genetics
Family
Female
Gene Expression
Gene Knock-In Techniques
Humans
Infant
Lymphoma, Large B-Cell, Diffuse
/ genetics
Male
Mice
Mice, Knockout
Middle Aged
Mutation
Pedigree
Protein Kinase Inhibitors
/ pharmacology
Syk Kinase
/ antagonists & inhibitors
Journal
Nature genetics
ISSN: 1546-1718
Titre abrégé: Nat Genet
Pays: United States
ID NLM: 9216904
Informations de publication
Date de publication:
04 2021
04 2021
Historique:
received:
25
04
2020
accepted:
27
01
2021
pubmed:
31
3
2021
medline:
21
4
2021
entrez:
30
3
2021
Statut:
ppublish
Résumé
Spleen tyrosine kinase (SYK) is a critical immune signaling molecule and therapeutic target. We identified damaging monoallelic SYK variants in six patients with immune deficiency, multi-organ inflammatory disease such as colitis, arthritis and dermatitis, and diffuse large B cell lymphomas. The SYK variants increased phosphorylation and enhanced downstream signaling, indicating gain of function. A knock-in (SYK-Ser544Tyr) mouse model of a patient variant (p.Ser550Tyr) recapitulated aspects of the human disease that could be partially treated with a SYK inhibitor or transplantation of bone marrow from wild-type mice. Our studies demonstrate that SYK gain-of-function variants result in a potentially treatable form of inflammatory disease.
Identifiants
pubmed: 33782605
doi: 10.1038/s41588-021-00803-4
pii: 10.1038/s41588-021-00803-4
pmc: PMC8245161
mid: NIHMS1667689
doi:
Substances chimiques
Protein Kinase Inhibitors
0
SYK protein, human
EC 2.7.10.2
Syk Kinase
EC 2.7.10.2
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
500-510Subventions
Organisme : Wellcome Trust
ID : 207556_Z_17_Z
Pays : United Kingdom
Organisme : Wellcome Trust
ID : 207556/Z/17/Z
Pays : United Kingdom
Organisme : Department of Health
Pays : United Kingdom
Organisme : NIDDK NIH HHS
ID : RC2 DK118640
Pays : United States
Organisme : NIDDK NIH HHS
ID : P30 DK034854
Pays : United States
Organisme : Medical Research Council
Pays : United Kingdom
Organisme : NIDDK NIH HHS
ID : RC2 DK122532
Pays : United States
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Cancer Research UK
Pays : United Kingdom
Investigateurs
Helen R Griffin
(HR)
Sophie Hambleton
(S)
Commentaires et corrections
Type : CommentIn
Type : ErratumIn
Références
Mocsai, A., Ruland, J. & Tybulewicz, V. L. The SYK tyrosine kinase: a crucial player in diverse biological functions. Nat. Rev. Immunol. 10, 387–402 (2010).
pubmed: 20467426
pmcid: 4782221
doi: 10.1038/nri2765
Dennehy, K. M. et al. Syk kinase is required for collaborative cytokine production induced through Dectin-1 and Toll-like receptors. Eur. J. Immunol. 38, 500–506 (2008).
pubmed: 18200499
pmcid: 2430329
doi: 10.1002/eji.200737741
Turner, M. et al. Perinatal lethality and blocked B-cell development in mice lacking the tyrosine kinase Syk. Nature 378, 298–302 (1995).
pubmed: 7477352
doi: 10.1038/378298a0
Cheng, A. M. et al. Syk tyrosine kinase required for mouse viability and B-cell development. Nature 378, 303–306 (1995).
pubmed: 7477353
doi: 10.1038/378303a0
Jakus, Z., Simon, E., Balazs, B. & Mocsai, A. Genetic deficiency of Syk protects mice from autoantibody-induced arthritis. Arthritis Rheum. 62, 1899–1910 (2010).
pubmed: 20201079
pmcid: 2972644
Arpaia, E., Shahar, M., Dadi, H., Cohen, A. & Roifman, C. M. Defective T cell receptor signaling and CD8
doi: 10.1016/0092-8674(94)90368-9
pubmed: 8124727
Kircher, M. et al. A general framework for estimating the relative pathogenicity of human genetic variants. Nat. Genet. 46, 310–315 (2014).
pubmed: 24487276
pmcid: 3992975
doi: 10.1038/ng.2892
Sada, K., Zhang, J. & Siraganian, R. P. Point mutation of a tyrosine in the linker region of Syk results in a gain of function. J. Immunol. 164, 338–344 (2000).
doi: 10.4049/jimmunol.164.1.338
pubmed: 10605028
Pine, P. R. et al. Inflammation and bone erosion are suppressed in models of rheumatoid arthritis following treatment with a novel Syk inhibitor. Clin. Immunol. 124, 244–257 (2007).
doi: 10.1016/j.clim.2007.03.543
pubmed: 17537677
Villasenor, A. G. et al. Structural insights for design of potent spleen tyrosine kinase inhibitors from crystallographic analysis of three inhibitor complexes. Chem. Biol. Drug Des. 73, 466–470 (2009).
pubmed: 19220318
doi: 10.1111/j.1747-0285.2009.00785.x
Gradler, U. et al. Structural and biophysical characterization of the Syk activation switch. J. Mol. Biol. 425, 309–333 (2013).
pubmed: 23154170
doi: 10.1016/j.jmb.2012.11.007
Gaffen, S. L., Jain, R., Garg, A. V. & Cua, D. J. The IL-23–IL-17 immune axis: from mechanisms to therapeutic testing. Nat. Rev. Immunol. 14, 585–600 (2014).
pubmed: 25145755
pmcid: 4281037
doi: 10.1038/nri3707
Korn, T., Bettelli, E., Oukka, M. & Kuchroo, V. K. IL-17 and Th17 Cells. Annu. Rev. Immunol. 27, 485–517 (2009).
pubmed: 19132915
doi: 10.1146/annurev.immunol.021908.132710
Taams, L. S., Steel, K. J. A., Srenathan, U., Burns, L. A. & Kirkham, B. W. IL-17 in the immunopathogenesis of spondyloarthritis. Nat. Rev. Rheumatol. 14, 453–466 (2018).
pubmed: 30006601
doi: 10.1038/s41584-018-0044-2
Shao, Y. et al. CRISPR/Cas-mediated genome editing in the rat via direct injection of one-cell embryos. Nat. Protoc. 9, 2493–2512 (2014).
pubmed: 25255092
doi: 10.1038/nprot.2014.171
Keller, B. et al. High SYK expression drives constitutive activation of CD21
pubmed: 28468967
doi: 10.4049/jimmunol.1700079
Csete, D. et al. Hematopoietic or osteoclast-specific deletion of Syk leads to increased bone mass in experimental mice. Front. Immunol. 10, 937 (2019).
pubmed: 31134061
pmcid: 6524727
doi: 10.3389/fimmu.2019.00937
Yang, G., Chen, X., Yan, Z., Zhu, Q. & Yang, C. CD11b promotes the differentiation of osteoclasts induced by RANKL through the spleen tyrosine kinase signalling pathway. J. Cell Mol. Med. 21, 3445–3452 (2017).
pubmed: 28661042
pmcid: 5706498
doi: 10.1111/jcmm.13254
Can, G. et al. The Syk inhibitor fostamatinib decreases the severity of colonic mucosal damage in a rodent model of colitis. J. Crohns Colitis 9, 907–917 (2015).
doi: 10.1093/ecco-jcc/jjv114
pubmed: 26116555
Hang, L. et al. Downregulation of the Syk signaling pathway in intestinal dendritic cells is sufficient to induce dendritic cells that inhibit colitis. J. Immunol. 197, 2948–2957 (2016).
pubmed: 27559049
doi: 10.4049/jimmunol.1600063
Hug, E., Hobeika, E., Reth, M. & Jumaa, H. Inducible expression of hyperactive Syk in B cells activates Blimp-1-dependent terminal differentiation. Oncogene 33, 3730–3741 (2014).
pubmed: 23955076
doi: 10.1038/onc.2013.326
Young, R. M. et al. Mouse models of non-Hodgkin lymphoma reveal Syk as an important therapeutic target. Blood 113, 2508–2516 (2009).
pubmed: 18981293
pmcid: 2947310
doi: 10.1182/blood-2008-05-158618
Schmitz, R. et al. Genetics and pathogenesis of diffuse large B-cell lymphoma. N. Engl. J. Med. 378, 1396–1407 (2018).
pubmed: 29641966
pmcid: 6010183
doi: 10.1056/NEJMoa1801445
Munshi, M. et al. SYK is activated by mutated MYD88 and drives pro-survival signaling in MYD88 driven B-cell lymphomas. Blood Cancer J. 10, 12 (2020).
pubmed: 32005797
pmcid: 6994488
doi: 10.1038/s41408-020-0277-6
Davis, R. E. et al. Chronic active B-cell-receptor signalling in diffuse large B-cell lymphoma. Nature 463, 88–92 (2010).
pubmed: 20054396
pmcid: 2845535
doi: 10.1038/nature08638
Tate, J. G. et al. COSMIC: the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Res. 47, D941–D947 (2019).
pubmed: 30371878
doi: 10.1093/nar/gky1015
Ruhe, J. E. et al. Genetic alterations in the tyrosine kinase transcriptome of human cancer cell lines. Cancer Res. 67, 11368–11376 (2007).
pubmed: 18056464
doi: 10.1158/0008-5472.CAN-07-2703
Malik, A. et al. SYK-CARD9 signaling axis promotes gut fungi-mediated inflammasome activation to restrict colitis and colon cancer. Immunity 49, 515–530 (2018).
pubmed: 30231985
pmcid: 6541497
doi: 10.1016/j.immuni.2018.08.024
Krisenko, M. O. & Geahlen, R. L. Calling in SYK: SYK’s dual role as a tumor promoter and tumor suppressor in cancer. Biochim. Biophys. Acta 1853, 254–263 (2015).
pubmed: 25447675
doi: 10.1016/j.bbamcr.2014.10.022
Kunwar, S., Devkota, A. R. & Ghimire, D. K. Fostamatinib, an oral spleen tyrosine kinase inhibitor, in the treatment of rheumatoid arthritis: a meta-analysis of randomized controlled trials. Rheumatol. Int. 36, 1077–1087 (2016).
pubmed: 27113955
doi: 10.1007/s00296-016-3482-7
Genovese, M. C. et al. An oral Syk kinase inhibitor in the treatment of rheumatoid arthritis: a three-month randomized, placebo-controlled, phase II study in patients with active rheumatoid arthritis that did not respond to biologic agents. Arthritis Rheum. 63, 337–345 (2011).
pubmed: 21279990
doi: 10.1002/art.30114
Deng, G. M., Kyttaris, V. C. & Tsokos, G. C. Targeting Syk in autoimmune rheumatic diseases. Front. Immunol. 7, 78 (2016).
pubmed: 27014261
pmcid: 4779881
doi: 10.3389/fimmu.2016.00078
Rolf, M. G. et al. In vitro pharmacological profiling of R406 identifies molecular targets underlying the clinical effects of fostamatinib. Pharm. Res. Perspect. 3, e00175 (2015).
doi: 10.1002/prp2.175
Leshchiner, E. S. et al. Small-molecule inhibitors directly target CARD9 and mimic its protective variant in inflammatory bowel disease. Proc. Natl Acad. Sci. USA 114, 11392–11397 (2017).
pubmed: 29073062
pmcid: 5664502
doi: 10.1073/pnas.1705748114
Cao, Z. et al. Ubiquitin ligase TRIM62 regulates CARD9-mediated anti-fungal immunity and intestinal inflammation. Immunity 43, 715–726 (2015).
pubmed: 26488816
pmcid: 4672733
doi: 10.1016/j.immuni.2015.10.005
Zong, X. N. & Li, H. Construction of a new growth references for China based on urban Chinese children: comparison with the WHO growth standards. PLoS ONE 8, e59569 (2013).
pubmed: 23527219
pmcid: 3602372
doi: 10.1371/journal.pone.0059569
Salzer, E. et al. RASGRP1 deficiency causes immunodeficiency with impaired cytoskeletal dynamics. Nat. Immunol. 17, 1352–1360 (2016).
pubmed: 27776107
pmcid: 6400263
doi: 10.1038/ni.3575
Ozen, A. et al. CD55 deficiency, early-onset protein-losing enteropathy, and thrombosis. N. Engl. J. Med. 377, 52–61 (2017).
pubmed: 28657829
pmcid: 6690356
doi: 10.1056/NEJMoa1615887
McLaren, W. et al. The ensembl variant effect predictor. Genome Biol. 17, 122 (2016).
pubmed: 27268795
pmcid: 4893825
doi: 10.1186/s13059-016-0974-4
Castel, S. E., Levy-Moonshine, A., Mohammadi, P., Banks, E. & Lappalainen, T. Tools and best practices for data processing in allelic expression analysis. Genome Biol. 16, 195 (2015).
pubmed: 26381377
pmcid: 4574606
doi: 10.1186/s13059-015-0762-6
The 1000 Genomes Project Consortium A global reference for human genetic variation. Nature 526, 68–74 (2015).
doi: 10.1038/nature15393
Pan, J., Thoeni, C., Muise, A., Yeger, H. & Cutz, E. Multilabel immunofluorescence and antigen reprobing on formalin-fixed paraffin-embedded sections: novel applications for precision pathology diagnosis. Mod. Pathol. 29, 557–569 (2016).
doi: 10.1038/modpathol.2016.52
pubmed: 26939874
Landau, M. et al. ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures. Nucleic Acids Res. 33, W299–W302 (2005).
pubmed: 15980475
pmcid: 1160131
doi: 10.1093/nar/gki370
Glaser, F. et al. ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information. Bioinformatics 19, 163–164 (2003).
doi: 10.1093/bioinformatics/19.1.163
pubmed: 12499312
van Maanen, M. A. et al. Stimulation of nicotinic acetylcholine receptors attenuates collagen-induced arthritis in mice. Arthritis Rheum. 60, 114–122 (2009).
doi: 10.1002/art.24177
pubmed: 19116908
Lutz, M. B. et al. An advanced culture method for generating large quantities of highly pure dendritic cells from mouse bone marrow. J. Immunol. Methods 223, 77–92 (1999).
doi: 10.1016/S0022-1759(98)00204-X
pubmed: 10037236
Coria, L. M. et al. A Brucella spp. protease inhibitor limits antigen lysosomal proteolysis, increases cross-presentation, and enhances CD8
doi: 10.4049/jimmunol.1501188
pubmed: 27084100
Wan, Y., Chong, L. W. & Evans, R. M. PPAR-γ regulates osteoclastogenesis in mice. Nat. Med. 13, 1496–1503 (2007).
doi: 10.1038/nm1672
pubmed: 18059282
Kawano, H. et al. Suppressive function of androgen receptor in bone resorption. Proc. Natl Acad. Sci. USA 100, 9416–9421 (2003).
pubmed: 12872002
pmcid: 170933
doi: 10.1073/pnas.1533500100
Schneider, C. A., Rasband, W. S. & Eliceiri, K. W. NIH Image to ImageJ: 25 years of image analysis. Nat. Methods 9, 671–675 (2012).
pubmed: 22930834
pmcid: 5554542
Rueden, C. T. et al. ImageJ2: ImageJ for the next generation of scientific image data. BMC Bioinform. 18, 529 (2017).
doi: 10.1186/s12859-017-1934-z
Schindelin, J. et al. Fiji: an open-source platform for biological-image analysis. Nat. Methods 9, 676–682 (2012).
pubmed: 22743772
doi: 10.1038/nmeth.2019