Crystallographic analysis of TarI and TarJ, a cytidylyltransferase and reductase pair for CDP-ribitol synthesis in Staphylococcus aureus wall teichoic acid biogenesis.


Journal

Journal of structural biology
ISSN: 1095-8657
Titre abrégé: J Struct Biol
Pays: United States
ID NLM: 9011206

Informations de publication

Date de publication:
06 2021
Historique:
received: 03 12 2020
revised: 29 03 2021
accepted: 30 03 2021
pubmed: 6 4 2021
medline: 27 1 2022
entrez: 5 4 2021
Statut: ppublish

Résumé

The cell wall of many pathogenic Gram-positive bacteria contains ribitol-phosphate wall teichoic acid (WTA), a polymer that is linked to virulence and regulation of essential physiological processes including cell division. CDP-ribitol, the activated precursor for ribitol-phosphate polymerization, is synthesized by a cytidylyltransferase and reductase pair known as TarI and TarJ, respectively. In this study, we present crystal structures of Staphylococcus aureus TarI and TarJ in their apo forms and in complex with substrates and products. The TarI structures illustrate the mechanism of CDP-ribitol synthesis from CTP and ribitol-phosphate and reveal structural changes required for substrate binding and catalysis. Insights into the upstream step of ribulose-phosphate reduction to ribitol-phosphate is provided by the structures of TarJ. Furthermore, we propose a general topology of the enzymes in a heterotetrameric form built using restraints from crosslinking mass spectrometry analysis. Together, our data present molecular details of CDP-ribitol production that may aid in the design of inhibitors against WTA biosynthesis.

Identifiants

pubmed: 33819634
pii: S1047-8477(21)00038-1
doi: 10.1016/j.jsb.2021.107733
pii:
doi:

Substances chimiques

Bacterial Proteins 0
Nucleoside Diphosphate Sugars 0
Pentosephosphates 0
Ribulosephosphates 0
Teichoic Acids 0
cytidine diphosphate ribitol 3506-17-0
ribitol-5-phosphate 3506-18-1
ribulose 5-phosphate 4151-19-3
Oxidoreductases EC 1.-
Nucleotidyltransferases EC 2.7.7.-
D-ribitol-5-phosphate cytidylyltransferase EC 2.7.7.40

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

107733

Subventions

Organisme : CIHR
Pays : Canada
Organisme : Howard Hughes Medical Institute
Pays : United States

Informations de copyright

Copyright © 2021 Elsevier Inc. All rights reserved.

Auteurs

Franco K K Li (FKK)

Department of Biochemistry and Molecular Biology and Centre for Blood Research, The University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.

Robert T Gale (RT)

Department of Biochemistry and Biomedical Sciences, Michael G. DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Ontario L8N 3ZS, Canada.

Evgeniy V Petrotchenko (EV)

Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec H3T 1E2, Canada; Center for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, Moscow 121205, Russia.

Christoph H Borchers (CH)

Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec H3T 1E2, Canada; Center for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, Moscow 121205, Russia; Gerald Bronfman Department of Oncology, Jewish General Hospital, McGill University, Montreal, Quebec H3T 1E2, Canada.

Eric D Brown (ED)

Department of Biochemistry and Biomedical Sciences, Michael G. DeGroote Institute for Infectious Disease Research, McMaster University, Hamilton, Ontario L8N 3ZS, Canada.

Natalie C J Strynadka (NCJ)

Department of Biochemistry and Molecular Biology and Centre for Blood Research, The University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada. Electronic address: ncjs@mail.ubc.ca.

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Classifications MeSH