A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.


Journal

The Journal of biological chemistry
ISSN: 1083-351X
Titre abrégé: J Biol Chem
Pays: United States
ID NLM: 2985121R

Informations de publication

Date de publication:
Historique:
received: 11 11 2020
revised: 09 04 2021
accepted: 15 04 2021
pubmed: 20 4 2021
medline: 21 8 2021
entrez: 19 4 2021
Statut: ppublish

Résumé

Polyprenyl groups, products of isoprenoid metabolism, are utilized in peptidoglycan biosynthesis, protein N-glycosylation, and other processes. These groups are formed by cis-prenyltransferases, which use allylic prenyl pyrophosphates as prenyl-donors to catalyze the C-prenylation of the general acceptor substrate, isopentenyl pyrophosphate. Repetition of this reaction forms (Z,E-mixed)-polyprenyl pyrophosphates, which are converted later into glycosyl carrier lipids, such as undecaprenyl phosphate and dolichyl phosphate. MM_0014 from the methanogenic archaeon Methanosarcina mazei is known as a versatile cis-prenyltransferase that accepts both isopentenyl pyrophosphate and dimethylallyl pyrophosphate as acceptor substrates. To learn more about this enzyme's catalytic activity, we determined the X-ray crystal structures of MM_0014 in the presence or absence of these substrates. Surprisingly, one structure revealed a complex with O-prenylglycerol, suggesting that the enzyme catalyzed the prenylation of glycerol contained in the crystallization buffer. Further analyses confirmed that the enzyme could catalyze the O-prenylation of small alcohols, such as 2-propanol, expanding our understanding of the catalytic ability of cis-prenyltransferases.

Identifiants

pubmed: 33872599
pii: S0021-9258(21)00468-3
doi: 10.1016/j.jbc.2021.100679
pmc: PMC8131916
pii:
doi:

Substances chimiques

Transferases EC 2.-
cis-prenyl transferase EC 2.5.1.-
2-Propanol ND2M416302

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

100679

Informations de copyright

Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Conflict of interest The authors declare no conflicts of interest in regard to this article.

Références

Appl Microbiol Biotechnol. 2015 Feb;99(4):1719-30
pubmed: 25125042
Acta Crystallogr D Biol Crystallogr. 2006 Jan;62(Pt 1):72-82
pubmed: 16369096
ACS Omega. 2017 Mar 31;2(3):930-936
pubmed: 30023621
Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55
pubmed: 15299926
J Biol Chem. 2013 Mar 1;288(9):6333-41
pubmed: 23306202
FEBS J. 2014 Jul;281(14):3165-76
pubmed: 24844160
Biochem Biophys Res Commun. 2019 Dec 3;520(2):291-296
pubmed: 31594637
Acta Biochim Pol. 2005;52(1):221-32
pubmed: 15827619
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501
pubmed: 20383002
Acta Crystallogr D Biol Crystallogr. 2013 Jul;69(Pt 7):1204-14
pubmed: 23793146
Chembiochem. 2015 Mar 23;16(5):772-81
pubmed: 25694050
Angew Chem Int Ed Engl. 2012 Jan 27;51(5):1124-37
pubmed: 22105807
Bioorg Chem. 2012 Aug;43:51-7
pubmed: 21993493
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):22-5
pubmed: 20057045
Angew Chem Int Ed Engl. 2017 Nov 20;56(47):14913-14917
pubmed: 28922556
Proc Natl Acad Sci U S A. 2009 Jun 30;106(26):10865-70
pubmed: 19487664
Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):119-24
pubmed: 18094475
Elife. 2016 Oct 28;5:
pubmed: 27790974
J Am Chem Soc. 2014 Apr 2;136(13):4837-40
pubmed: 24640943
J Antibiot (Tokyo). 2009 Jul;62(7):385-92
pubmed: 19557032
J Biol Chem. 2017 Oct 20;292(42):17351-17361
pubmed: 28842490
J Am Chem Soc. 2014 Feb 19;136(7):2892-6
pubmed: 24475925
Appl Environ Microbiol. 2020 May 5;86(10):
pubmed: 32144102
PLoS One. 2015 Mar 18;10(3):e0119302
pubmed: 25786135
ACS Catal. 2018 May 4;8(5):4299-4312
pubmed: 30345154
Angew Chem Int Ed Engl. 2016 Apr 4;55(15):4721-4
pubmed: 26922900
Annu Rev Biochem. 2020 Jun 20;89:821-851
pubmed: 32228045
Genes Cells. 2001 Jun;6(6):495-506
pubmed: 11442630
FEBS J. 2016 Jun;283(12):2369-83
pubmed: 27129422
Angew Chem Int Ed Engl. 2014 Oct 6;53(41):11019-22
pubmed: 25115835
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):271-81
pubmed: 21460445
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32
pubmed: 20124692
Chem Rec. 2006;6(4):194-205
pubmed: 16900467
Bioorg Med Chem. 2008 Sep 1;16(17):8117-26
pubmed: 18682327
Archaea. 2012;2012:438931
pubmed: 22645416
FEBS Lett. 2007 Jun 26;581(16):2889-93
pubmed: 17543953
Angew Chem Int Ed Engl. 2018 Jan 15;57(3):683-687
pubmed: 29215779
Plant Physiol. 2014 Jan;164(1):80-91
pubmed: 24254315

Auteurs

Miyako Okada (M)

Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Aichi, Japan.

Hideaki Unno (H)

Graduate School of Engineering, Nagasaki University, Nagasaki, Nagasaki, Japan; Organization for Marine Science and Technology, Nagasaki University, Nagasaki, Nagasaki, Japan.

Koh-Ichi Emi (KI)

Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Aichi, Japan.

Mayuko Matsumoto (M)

Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Aichi, Japan.

Hisashi Hemmi (H)

Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Aichi, Japan. Electronic address: hhemmi@agr.nagoya-u.ac.jp.

Articles similaires

alpha-Synuclein Humans Animals Mice Lewy Body Disease

Mutational analysis of Phanerochaete chrysosporium´s purine transporter.

Mariana Barraco-Vega, Manuel Sanguinetti, Gabriela da Rosa et al.
1.00
Phanerochaete Fungal Proteins Purines Aspergillus nidulans DNA Mutational Analysis

Structural basis for molecular assembly of fucoxanthin chlorophyll

Koji Kato, Yoshiki Nakajima, Jian Xing et al.
1.00
Diatoms Photosystem I Protein Complex Chlorophyll Binding Proteins Cryoelectron Microscopy Light-Harvesting Protein Complexes
DNA Glycosylases Nucleosomes Humans 8-Hydroxy-2'-Deoxyguanosine DNA Repair

Classifications MeSH