Sporulation in solventogenic and acetogenic clostridia.

ABE production Acetogens Quorum sensing Sigma factors Solventogenic clostridia Sporulation

Journal

Applied microbiology and biotechnology
ISSN: 1432-0614
Titre abrégé: Appl Microbiol Biotechnol
Pays: Germany
ID NLM: 8406612

Informations de publication

Date de publication:
May 2021
Historique:
received: 21 12 2020
accepted: 07 04 2021
revised: 03 04 2021
pubmed: 27 4 2021
medline: 15 5 2021
entrez: 26 4 2021
Statut: ppublish

Résumé

The Clostridium genus harbors compelling organisms for biotechnological production processes; while acetogenic clostridia can fix C1-compounds to produce acetate and ethanol, solventogenic clostridia can utilize a wide range of carbon sources to produce commercially valuable carboxylic acids, alcohols, and ketones by fermentation. Despite their potential, the conversion by these bacteria of carbohydrates or C1 compounds to alcohols is not cost-effective enough to result in economically viable processes. Engineering solventogenic clostridia by impairing sporulation is one of the investigated approaches to improve solvent productivity. Sporulation is a cell differentiation process triggered in bacteria in response to exposure to environmental stressors. The generated spores are metabolically inactive but resistant to harsh conditions (UV, chemicals, heat, oxygen). In Firmicutes, sporulation has been mainly studied in bacilli and pathogenic clostridia, and our knowledge of sporulation in solvent-producing or acetogenic clostridia is limited. Still, sporulation is an integral part of the cellular physiology of clostridia; thus, understanding the regulation of sporulation and its connection to solvent production may give clues to improve the performance of solventogenic clostridia. This review aims to provide an overview of the triggers, characteristics, and regulatory mechanism of sporulation in solventogenic clostridia. Those are further compared to the current knowledge on sporulation in the industrially relevant acetogenic clostridia. Finally, the potential applications of spores for process improvement are discussed.Key Points• The regulatory network governing sporulation initiation varies in solventogenic clostridia.• Media composition and cell density are the main triggers of sporulation.• Spores can be used to improve the fermentation process.

Identifiants

pubmed: 33900426
doi: 10.1007/s00253-021-11289-9
pii: 10.1007/s00253-021-11289-9
pmc: PMC8102284
doi:

Substances chimiques

Butanols 0
Solvents 0
Ethanol 3K9958V90M

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

3533-3557

Subventions

Organisme : H2020 Marie Skłodowska-Curie Actions
ID : 642068
Organisme : Horizon 2020 Framework Programme
ID : 761042

Références

J Ind Microbiol Biotechnol. 2009 Sep;36(9):1127-38
pubmed: 19562394
Front Microbiol. 2015 Sep 09;6:950
pubmed: 26441884
J Bacteriol. 1997 Sep;179(17):5442-7
pubmed: 9286999
BMC Genomics. 2010 Dec 20;11:720
pubmed: 21172000
Appl Environ Microbiol. 2020 Jun 17;86(13):
pubmed: 32385078
Int J Syst Evol Microbiol. 2009 Feb;59(Pt 2):285-94
pubmed: 19196767
J Bacteriol. 2013 Jan;195(2):253-60
pubmed: 23123912
J Bacteriol. 2007 Jul;189(13):4681-7
pubmed: 17468248
Food Microbiol. 2014 Dec;44:156-67
pubmed: 25084658
Biotechnol J. 2020 Oct;15(10):e2000136
pubmed: 32713052
Mol Microbiol. 2000 Sep;37(5):1172-85
pubmed: 10972834
J Mol Microbiol Biotechnol. 2000 Jan;2(1):115-24
pubmed: 10937496
Nature. 1959 Jan 10;183(4654):124-5
pubmed: 13622720
Ann Transl Med. 2015 May;3(Suppl 1):S21
pubmed: 26046067
Appl Microbiol Biotechnol. 2012 May;94(3):729-41
pubmed: 22249720
J Ind Microbiol Biotechnol. 2006 Apr;33(4):298-308
pubmed: 16308714
BMC Genomics. 2011 Feb 02;12:93
pubmed: 21284892
Adv Microb Physiol. 2001;44:35-91
pubmed: 11407115
Biotechnol Biofuels. 2015 Apr 16;8:68
pubmed: 25904983
Appl Environ Microbiol. 2020 Aug 18;86(17):
pubmed: 32631858
Appl Environ Microbiol. 2014 Mar;80(6):2011-20
pubmed: 24441158
J Mol Microbiol Biotechnol. 2000 Jan;2(1):101-5
pubmed: 10937494
Curr Microbiol. 2018 Jan;75(1):107-115
pubmed: 29189942
Sci Rep. 2019 Dec 2;9(1):18081
pubmed: 31792266
Appl Environ Microbiol. 2017 Mar 17;83(7):
pubmed: 28130303
Metab Eng. 2019 Mar;52:293-302
pubmed: 30633974
Front Microbiol. 2016 May 11;7:694
pubmed: 27242719
Microbiol Spectr. 2013 Dec;1(2):
pubmed: 26184964
J Bacteriol. 2004 Apr;186(7):1959-71
pubmed: 15028679
J Appl Microbiol. 2012 Sep;113(3):485-98
pubmed: 22574673
J Bacteriol. 2011 May;193(10):2429-40
pubmed: 21421765
Appl Microbiol Biotechnol. 2016 Feb;100(3):1523-1529
pubmed: 26572521
BMC Genomics. 2018 Apr 10;19(1):242
pubmed: 29636009
Res Microbiol. 2015 May;166(4):244-54
pubmed: 25576776
J Bacteriol. 2005 Feb;187(4):1357-68
pubmed: 15687200
Curr Opin Microbiol. 2004 Dec;7(6):579-86
pubmed: 15556029
Sci Rep. 2017 Oct 13;7(1):13135
pubmed: 29030620
BMC Genomics. 2012 Jul 30;13:349
pubmed: 22846451
Appl Environ Microbiol. 2008 Dec;74(24):7709-14
pubmed: 18849451
Biotechnol Biofuels. 2015 Dec 24;8:227
pubmed: 26705421
Future Microbiol. 2019 Mar;14:353-363
pubmed: 30855188
Biotechnol Biofuels. 2019 Feb 14;12:31
pubmed: 30809274
Mol Microbiol. 2011 Feb;79(4):882-99
pubmed: 21299645
Appl Environ Microbiol. 2011 Jul;77(13):4473-85
pubmed: 21602379
Microbiol Rev. 1986 Dec;50(4):484-524
pubmed: 3540574
J Bacteriol. 2014 Jan;196(2):287-99
pubmed: 24187083
Biotechnol Biofuels. 2019 Oct 13;12:243
pubmed: 31636702
J Bacteriol. 2005 Mar;187(6):1930-6
pubmed: 15743939
Int J Biol Macromol. 2021 Jan 1;166:238-250
pubmed: 33115650
Int J Syst Evol Microbiol. 2001 Nov;51(Pt 6):2095-103
pubmed: 11760952
Nat Commun. 2017 Nov 15;8(1):1514
pubmed: 29138399
J Biophys Biochem Cytol. 1959 Jan 25;5(1):129-34
pubmed: 13630944
Microbiology (Reading). 2020 Jun;166(6):579-592
pubmed: 32375981
Infect Immun. 2011 Jun;79(6):2451-9
pubmed: 21464088
Appl Environ Microbiol. 2012 Feb;78(4):1113-22
pubmed: 22179241
Appl Environ Microbiol. 2008 Dec;74(24):7497-506
pubmed: 18931289
Biotechnol Biofuels. 2018 Sep 18;11:252
pubmed: 30250504
ACS Synth Biol. 2019 Oct 18;8(10):2270-2279
pubmed: 31526005
Appl Microbiol Biotechnol. 2015 Jan;99(2):1011-22
pubmed: 25472438
Mikrobiologiia. 1981 May-Jun;50(3):458-66
pubmed: 7278720
Int J Syst Bacteriol. 1994 Oct;44(4):812-26
pubmed: 7981107
Curr Opin Biotechnol. 2008 Oct;19(5):420-9
pubmed: 18760360
Nat Rev Microbiol. 2005 Dec;3(12):969-78
pubmed: 16261177
Trends Biotechnol. 2003 Aug;21(8):338-45
pubmed: 12902170
Biotechnol Biofuels. 2020 Sep 26;13:163
pubmed: 32999686
Genomics. 2021 Jan;113(1 Pt 2):1109-1119
pubmed: 33166602
J Ind Microbiol Biotechnol. 2001 Nov;27(5):287-91
pubmed: 11781803
mBio. 2019 Jan 22;10(1):
pubmed: 30670619
PLoS One. 2015 Jun 22;10(6):e0131169
pubmed: 26098117
Biotechnol Biofuels. 2020 Mar 6;13:39
pubmed: 32165923
J Biotechnol. 2017 Dec 10;263:36-44
pubmed: 29050876
Front Microbiol. 2017 Sep 21;8:1793
pubmed: 28983286
Appl Environ Microbiol. 1986 Jul;52(1):86-91
pubmed: 16347119
Appl Environ Microbiol. 1989 Apr;55(4):970-6
pubmed: 16347898
J Ind Microbiol Biotechnol. 2020 Mar;47(3):319-328
pubmed: 32103460
Appl Microbiol Biotechnol. 2020 Jun;104(11):5011-5023
pubmed: 32242264
PLoS One. 2017 Mar 30;12(3):e0174713
pubmed: 28358838
Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6459-64
pubmed: 19380751
Appl Environ Microbiol. 1987 Dec;53(12):2761-6
pubmed: 16347493
Nat Rev Microbiol. 2019 Nov;17(11):651-664
pubmed: 31485032
Biotechnol Biofuels. 2017 Mar 9;10:58
pubmed: 28286553
Mol Microbiol. 2011 May;80(3):641-54
pubmed: 21401736
Curr Opin Biotechnol. 2011 Jun;22(3):337-43
pubmed: 21367598
Biotechnol Adv. 2013 Jan-Feb;31(1):58-67
pubmed: 22306328
Adv Appl Microbiol. 2019;106:79-111
pubmed: 30798805
Anaerobe. 2017 Dec;48:135-143
pubmed: 28823884
J Microencapsul. 2015;32(3):290-9
pubmed: 25761520
J Mol Microbiol Biotechnol. 2011;20(1):1-15
pubmed: 21212688
Environ Microbiol. 2019 Oct;21(10):3548-3563
pubmed: 31020759
Mol Microbiol. 2016 Apr;100(1):204-28
pubmed: 26690930
J Bacteriol. 2008 Jul;190(13):4648-59
pubmed: 18469104
Microbiol Spectr. 2019 Nov;7(6):
pubmed: 31858953
Appl Environ Microbiol. 2005 Apr;71(4):1987-95
pubmed: 15812030
FEMS Microbiol Lett. 2000 Apr 15;185(2):123-8
pubmed: 10754235
J Appl Microbiol. 2015 Apr;118(4):976-88
pubmed: 25565038
Sci Rep. 2016 Dec 14;6:38818
pubmed: 27966599
FEMS Microbiol Rev. 1995 Oct;17(3):331-40
pubmed: 7576771
J Bacteriol. 2002 Jul;184(13):3586-97
pubmed: 12057953
J Anim Sci Biotechnol. 2020 Feb 20;11:24
pubmed: 32099648
Biotechnol Biofuels. 2020 May 8;13:84
pubmed: 32411297
Biotechnol Bioeng. 2007 Aug 15;97(6):1460-9
pubmed: 17274071
J Nanobiotechnology. 2003 Dec 15;1(1):6
pubmed: 14675488
Future Microbiol. 2011 Sep;6(9):969-71
pubmed: 21958135
Curr Opin Biotechnol. 2012 Jun;23(3):364-81
pubmed: 22079352
Biochem Biophys Res Commun. 2019 Feb 26;510(1):13-19
pubmed: 30660365
Appl Microbiol Biotechnol. 2019 Jul;103(14):5549-5566
pubmed: 31139901
PLoS One. 2019 Nov 7;14(11):e0224560
pubmed: 31697692
Biosci Biotechnol Biochem. 2007 Jan;71(1):58-68
pubmed: 17213660
Math Biosci. 2013 Jun;243(2):223-39
pubmed: 23538287
Bacteriol Rev. 1948 Mar;12(1):19-77
pubmed: 16350116
Appl Environ Microbiol. 1983 Apr;45(4):1389-93
pubmed: 16346276
J Bacteriol. 2004 Aug;186(16):5221-9
pubmed: 15292123
J Bacteriol. 2000 Oct;182(19):5505-12
pubmed: 10986255
Appl Microbiol Biotechnol. 2017 Nov;101(22):8279-8291
pubmed: 28990140
Appl Environ Microbiol. 1991 Sep;57(9):2544-8
pubmed: 1722664
Trends Microbiol. 2014 Jul;22(7):406-16
pubmed: 24814671
ACS Sustain Chem Eng. 2018 Jul 2;6(7):9304-9313
pubmed: 30271690
Methods. 2020 Feb 1;172:51-60
pubmed: 31362039
Curr Opin Microbiol. 2015 Apr;24:88-95
pubmed: 25646759
Biotechnol Biofuels. 2016 Oct 18;9:220
pubmed: 27777622
PLoS One. 2017 Jan 24;12(1):e0170406
pubmed: 28118386
Front Bioeng Biotechnol. 2020 Mar 20;8:214
pubmed: 32266241
Appl Environ Microbiol. 1987 Apr;53(4):639-43
pubmed: 16347311
J Bacteriol. 1970 Sep;103(3):529-35
pubmed: 4990846
J Ind Microbiol Biotechnol. 2001 Nov;27(5):314-21
pubmed: 11781807
Front Microbiol. 2017 Jan 30;8:23
pubmed: 28194137
Biotechnol Bioeng. 2000 Jan 5;67(1):1-11
pubmed: 10581430
Anaerobe. 2014 Oct;29:113-7
pubmed: 24211310
Appl Environ Microbiol. 1999 Mar;65(3):936-45
pubmed: 10049845
Annu Rev Microbiol. 2020 Sep 8;74:587-606
pubmed: 32680450
Bioresour Technol. 2013 Jun;137:153-9
pubmed: 23584415
Bioresour Technol. 2016 Nov;219:430-438
pubmed: 27513648
Biotechnol J. 2017 Nov;12(11):
pubmed: 28762642
J Ind Microbiol Biotechnol. 2020 Oct;47(9-10):753-787
pubmed: 32894379
AMB Express. 2013 Jan 07;3(1):3
pubmed: 23294525
J Bacteriol. 2020 Jan 2;202(2):
pubmed: 31659010
Int J Syst Evol Microbiol. 2016 Feb;66(2):1009-1016
pubmed: 26643615
Biotechnol Bioeng. 2017 Sep;114(9):1959-1969
pubmed: 28475235
ACS Synth Biol. 2019 Jun 21;8(6):1379-1390
pubmed: 31181894
Appl Microbiol Biotechnol. 2016 Nov;100(21):9081-9089
pubmed: 27276910
BMC Genomics. 2018 May 30;19(1):415
pubmed: 29843608
J Biotechnol. 2015 Dec 20;216:29-35
pubmed: 26471284
Environ Microbiol. 2013 Oct;15(10):2631-41
pubmed: 23834245
Metab Eng. 2017 Mar;40:124-137
pubmed: 28119139
Trends Microbiol. 2017 Aug;25(8):637-647
pubmed: 28408070
Proc Natl Acad Sci U S A. 1988 Jun;85(12):4369-73
pubmed: 3132711
Adv Microb Physiol. 1986;28:1-64
pubmed: 3544734
Zhonghua Min Guo Wei Sheng Wu Xue Za Zhi. 1978 Jun;11(2):50-61
pubmed: 215387
Genes (Basel). 2020 Apr 23;11(4):
pubmed: 32340238
Appl Environ Microbiol. 2019 Feb 20;85(5):
pubmed: 30578270
Front Microbiol. 2016 Nov 11;7:1791
pubmed: 27891119
Appl Environ Microbiol. 2015 Dec;81(24):8379-91
pubmed: 26431975
Int J Syst Evol Microbiol. 2005 Sep;55(Pt 5):2085-2091
pubmed: 16166714
Nat Prod Rep. 2013 Mar;30(3):392-428
pubmed: 23263685
ACS Omega. 2019 Jul 31;4(7):12978-12982
pubmed: 31460424
Appl Microbiol Biotechnol. 2012 Feb;93(4):1485-94
pubmed: 22052388
J Bacteriol. 2011 Mar;193(6):1414-26
pubmed: 21217008
Microbiology (Reading). 1996 Aug;142 ( Pt 8):2079-86
pubmed: 8760920
Math Biosci. 2013 Feb;241(2):149-66
pubmed: 23201580
Environ Microbiol. 2012 Nov;14(11):2870-90
pubmed: 22882546
Sci Rep. 2019 Feb 4;9(1):1371
pubmed: 30718562
J Basic Microbiol. 2016 Dec;56(12):1331-1337
pubmed: 27281458
Structure. 2002 Aug;10(8):1041-50
pubmed: 12176382
J Biotechnol. 2012 Oct 31;161(3):366-77
pubmed: 22484128
Front Microbiol. 2018 Feb 12;9:154
pubmed: 29483900
Microbiology (Reading). 2013 Dec;159(Pt 12):2558-2570
pubmed: 24068240
Genome Biol. 2008;9(7):R114
pubmed: 18631379
Microbiol Mol Biol Rev. 2015 Mar;79(1):19-37
pubmed: 25631287
Biochem J. 1968 Oct;109(5):819-24
pubmed: 4972256
Biotechnol Biofuels. 2016 Jan 04;9:4
pubmed: 26732067
Appl Environ Microbiol. 2005 Jan;71(1):530-7
pubmed: 15640230
Bioresour Technol. 2014 Oct;169:723-730
pubmed: 25108474
Biotechnol Bioeng. 2017 Jan;114(1):106-112
pubmed: 27474812
Biotechnol J. 2016 Jul;11(7):961-72
pubmed: 27213844
Biotechnol Bioeng. 2019 Jun;116(6):1475-1483
pubmed: 30739328
Int J Syst Bacteriol. 1995 Oct;45(4):693-705
pubmed: 7547288
Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):E3513-22
pubmed: 23169620
Enzyme Microb Technol. 2019 Oct;129:109352
pubmed: 31307579
Appl Environ Microbiol. 1983 Mar;45(3):1160-3
pubmed: 16346237
Mol Cell Proteomics. 2018 Jun;17(6):1156-1169
pubmed: 29523768
FEMS Microbiol Lett. 2016 Jul;363(13):
pubmed: 27199350
Sci Rep. 2019 May 10;9(1):7228
pubmed: 31076628
J Appl Microbiol. 2016 May;120(5):1271-81
pubmed: 26789025
Appl Environ Microbiol. 1984 Nov;48(5):1064-5
pubmed: 16346665
FEMS Microbiol Lett. 2019 Mar 1;366(6):
pubmed: 30874768
J Bacteriol. 2011 Oct;193(19):5130-7
pubmed: 21784928
Front Microbiol. 2020 Sep 15;11:556064
pubmed: 33042064
J Ind Microbiol Biotechnol. 2016 Jun;43(6):741-50
pubmed: 27021843
Structure. 2018 Apr 3;26(4):640-648.e5
pubmed: 29526435
PLoS Genet. 2018 Sep 13;14(9):e1007470
pubmed: 30212463
BMC Genomics. 2018 Jun 1;19(1):423
pubmed: 29859037
Water Res. 2004 Jul;38(12):2898-906
pubmed: 15223284
J Bacteriol. 2004 Apr;186(7):2006-18
pubmed: 15028684
Genome Biol Evol. 2019 Jul 1;11(7):2035-2044
pubmed: 31076745
Int J Food Microbiol. 2008 Dec 10;128(2):385-9
pubmed: 18986726
J Biotechnol. 2021 Mar 10;329:49-55
pubmed: 33556425
J Mol Microbiol Biotechnol. 2000 Jul;2(3):265-9
pubmed: 10937434

Auteurs

Mamou Diallo (M)

Wageningen Food and Biobased Research, Wageningen, The Netherlands. mamou.diallo@gmx.net.
Laboratory of Microbiology, Wageningen University & Research, Wageningen, The Netherlands. mamou.diallo@gmx.net.

Servé W M Kengen (SWM)

Laboratory of Microbiology, Wageningen University & Research, Wageningen, The Netherlands.

Ana M López-Contreras (AM)

Wageningen Food and Biobased Research, Wageningen, The Netherlands. ana.lopez-contreras@wur.nl.

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