Target 5000: a standardized all-Ireland pathway for the diagnosis and management of inherited retinal degenerations.

Clinical diagnostic algorithm Genetic diagnosis Inherited retinal degenerations Ocular genetics Public and patient involvement Retinal dystrophy

Journal

Orphanet journal of rare diseases
ISSN: 1750-1172
Titre abrégé: Orphanet J Rare Dis
Pays: England
ID NLM: 101266602

Informations de publication

Date de publication:
05 05 2021
Historique:
received: 01 01 2021
accepted: 23 04 2021
entrez: 6 5 2021
pubmed: 7 5 2021
medline: 29 6 2021
Statut: epublish

Résumé

Inherited retinal degenerations (IRD) are rare genetic disorders with > 300 known genetic loci, manifesting variably progressive visual dysfunction. IRDs were historically underserved due to lack of effective interventions. Many novel therapies will require accurate diagnosis (phenotype and genotype), thus an efficient and effective pathway for assessment and management is required. Using surveys of existing practice patterns and advice from international experts, an all-Ireland IRD service (Target 5000) was designed. Detailed phenotyping was followed by next generation genetic sequencing in both a research and accredited laboratory. Unresolved pedigrees underwent further studies (whole gene/whole exome/whole genome sequencing). Novel variants were interrogated for pathogenicity (cascade screening, in silico analysis, functional studies). A multidisciplinary team (MDT; ophthalmologists, physicians, geneticists, genetic counsellors) reconciled phenotype with genotype. A bespoke care plan was created for each patient comprising supports, existing interventions, and novel therapies/clinical trials. Prior to Target 5000, a significant cohort of patients were not engaged with healthcare/support services due to lack of effective interventions. Pathogenic or likely pathogenic variants in IRD-associated genes were detected in 62.3%, with 11.6% having variants of unknown significance. The genotyping arm of Target 5000 allowed a 42.73% cost saving over independent testing, plus the value of MDT expertise/processing. Partial funding has transferred from charitable sources to government resources. Target 5000 demonstrates efficacious and efficient clinical/genetic diagnosis, while discovering novel IRD-implicated genes/variants and investigating mechanisms of disease and avenues of intervention. This model could be used to develop similar IRD programmes in small/medium-sized nations.

Identifiants

pubmed: 33952326
doi: 10.1186/s13023-021-01841-1
pii: 10.1186/s13023-021-01841-1
pmc: PMC8097252
doi:

Types de publication

Letter Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

200

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Auteurs

Kirk A J Stephenson (KAJ)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland. kirkstephenson@hotmail.com.

Julia Zhu (J)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.

Niamh Wynne (N)

The Research Foundation, Royal Victoria Eye and Ear Hospital, Dublin, Ireland.

Adrian Dockery (A)

Ocular Genetics Unit, Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

Rebecca M Cairns (RM)

Belfast Health and Social Care Trust Hospitals, Belfast, Northern Ireland.

Emma Duignan (E)

The Research Foundation, Royal Victoria Eye and Ear Hospital, Dublin, Ireland.

Laura Whelan (L)

Ocular Genetics Unit, Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

Conor P Malone (CP)

The Research Foundation, Royal Victoria Eye and Ear Hospital, Dublin, Ireland.

Hilary Dempsey (H)

The Research Foundation, Royal Victoria Eye and Ear Hospital, Dublin, Ireland.

Karen Collins (K)

The Research Foundation, Royal Victoria Eye and Ear Hospital, Dublin, Ireland.

Shana Routledge (S)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.

Rajiv Pandey (R)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.

Elaine Crossan (E)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.
National Council for the Blind of Ireland, Whitworth Road, Dublin 9, Ireland.

Jacqueline Turner (J)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.

James J O'Byrne (JJ)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.

Laura Brady (L)

Fighting Blindness Ireland, Ely Place, Dublin 2, Ireland.

Giuliana Silvestri (G)

Belfast Health and Social Care Trust Hospitals, Belfast, Northern Ireland.

Paul F Kenna (PF)

The Research Foundation, Royal Victoria Eye and Ear Hospital, Dublin, Ireland.
Ocular Genetics Unit, Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

G Jane Farrar (GJ)

Ocular Genetics Unit, Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland.

David J Keegan (DJ)

Mater Clinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.

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Classifications MeSH