Isotopic tracing reveals single-cell assimilation of a macroalgal polysaccharide by a few marine Flavobacteria and Gammaproteobacteria.
Journal
The ISME journal
ISSN: 1751-7370
Titre abrégé: ISME J
Pays: England
ID NLM: 101301086
Informations de publication
Date de publication:
10 2021
10 2021
Historique:
received:
06
01
2021
accepted:
09
04
2021
revised:
25
03
2021
pubmed:
7
5
2021
medline:
23
9
2021
entrez:
6
5
2021
Statut:
ppublish
Résumé
Algal polysaccharides constitute a diverse and abundant reservoir of organic matter for marine heterotrophic bacteria, central to the oceanic carbon cycle. We investigated the uptake of alginate, a major brown macroalgal polysaccharide, by microbial communities from kelp-dominated coastal habitats. Congruent with cell growth and rapid substrate utilization, alginate amendments induced a decrease in bacterial diversity and a marked compositional shift towards copiotrophic bacteria. We traced
Identifiants
pubmed: 33953365
doi: 10.1038/s41396-021-00987-x
pii: 10.1038/s41396-021-00987-x
pmc: PMC8443679
doi:
Substances chimiques
Polysaccharides
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
3062-3075Informations de copyright
© 2021. The Author(s).
Références
Mar Biotechnol (NY). 2012 Apr;14(2):189-202
pubmed: 21826589
Environ Microbiol. 2021 Jun;23(6):3130-3148
pubmed: 33876546
J Biol Chem. 2013 Aug 9;288(32):23021-37
pubmed: 23782694
Biotechnol Biofuels. 2019 Apr 30;12:102
pubmed: 31168320
Nucleic Acids Res. 2013 Jan 7;41(1):e1
pubmed: 22933715
ISME J. 2015 Jun;9(6):1410-22
pubmed: 25478683
Nucleic Acids Res. 2019 Jan 8;47(D1):D427-D432
pubmed: 30357350
Appl Environ Microbiol. 2015 Oct 30;82(1):364-74
pubmed: 26519393
Environ Microbiol Rep. 2020 Feb;12(1):30-37
pubmed: 31692275
mBio. 2012 Sep 18;3(5):
pubmed: 22991429
ISME J. 2016 Sep;10(9):2158-73
pubmed: 26953597
Biochim Biophys Acta Gen Subj. 2018 Sep;1862(9):1862-1869
pubmed: 29864445
Front Microbiol. 2018 Mar 28;9:570
pubmed: 29643843
Front Microbiol. 2019 Mar 18;10:504
pubmed: 30936857
Ann Rev Mar Sci. 2017 Jan 3;9:231-255
pubmed: 27687974
ISME J. 2019 Jul;13(7):1814-1830
pubmed: 30872807
Front Microbiol. 2018 Nov 22;9:2740
pubmed: 30524390
ISME J. 2015 Feb;9(2):485-96
pubmed: 25303712
Environ Microbiol. 2015 Oct;17(10):3766-80
pubmed: 25684402
PLoS One. 2018 Jan 3;13(1):e0189616
pubmed: 29298299
Nat Methods. 2016 Jul;13(7):581-3
pubmed: 27214047
Front Microbiol. 2018 Oct 03;9:2342
pubmed: 30337916
Environ Microbiol. 2016 Dec;18(12):4610-4627
pubmed: 27768819
Microbiology (Reading). 1996 May;142 ( Pt 5):1097-1106
pubmed: 8704951
Elife. 2016 Apr 07;5:e11888
pubmed: 27054497
PLoS One. 2013 Apr 22;8(4):e61217
pubmed: 23630581
Genome Biol. 2014;15(12):550
pubmed: 25516281
ISME J. 2019 Nov;13(11):2800-2816
pubmed: 31316134
J Bacteriol. 2017 Jul 11;199(15):
pubmed: 28138099
ISME J. 2017 Jul;11(7):1640-1650
pubmed: 28323277
Science. 1992 Mar 20;255(5051):1561-4
pubmed: 17820170
Ecology. 2021 Feb;102(2):e03221
pubmed: 33048348
Front Microbiol. 2015 Dec 24;6:1487
pubmed: 26734000
Environ Microbiol. 2020 Apr;22(4):1381-1396
pubmed: 32090403
Environ Microbiol. 2017 Jun;19(6):2164-2181
pubmed: 28205313
Ann Rev Mar Sci. 2021 Jan;13:81-108
pubmed: 32726567
Environ Microbiol. 2012 Sep;14(9):2379-94
pubmed: 22513138
Cytometry. 1993;14(2):136-43
pubmed: 7679962
Front Microbiol. 2017 Sep 21;8:1808
pubmed: 28983288
Front Microbiol. 2016 May 12;7:703
pubmed: 27242725
Biol Cell. 1992;74(1):43-50
pubmed: 1511246
Environ Microbiol. 2016 Dec;18(12):4369-4377
pubmed: 27059936
Nat Commun. 2016 Sep 22;7:12860
pubmed: 27653556
Genome Announc. 2018 Jun 21;6(25):
pubmed: 29930069
Syst Appl Microbiol. 2012 Dec;35(8):541-8
pubmed: 23026312
Sci Rep. 2017 Oct 20;7(1):13656
pubmed: 29057942
ISME J. 2019 May;13(5):1119-1132
pubmed: 30531893
Methods Mol Biol. 2007;353:153-64
pubmed: 17332640
Ecology. 2019 Oct;100(10):e02798
pubmed: 31233610
Mol Ecol. 2019 Jun;28(11):2846-2859
pubmed: 30830717
FEMS Microbiol Rev. 2012 Mar;36(2):486-511
pubmed: 22092433
BMC Genomics. 2008 Feb 08;9:75
pubmed: 18261238
Biochim Biophys Acta. 2005 Aug 5;1724(3):228-38
pubmed: 15982822
Nat Biotechnol. 2019 Apr;37(4):420-423
pubmed: 30778233
PLoS One. 2009;4(4):e5299
pubmed: 19390573
Microbiologyopen. 2020 May;9(5):e1013
pubmed: 32166910
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
PeerJ. 2016 Oct 18;4:e2584
pubmed: 27781170
Protein Expr Purif. 2019 Feb;154:44-51
pubmed: 30248453
Int J Syst Evol Microbiol. 2016 Dec;66(12):5544-5549
pubmed: 27902199
Front Microbiol. 2018 Aug 20;9:1914
pubmed: 30177919
Front Microbiol. 2020 Sep 25;11:588778
pubmed: 33101262
Environ Microbiol. 2019 Feb;21(2):730-749
pubmed: 30672084
Appl Environ Microbiol. 2015 Nov 20;82(3):868-77
pubmed: 26590273
Mar Environ Res. 2020 Mar;155:104874
pubmed: 31975691
ISME J. 2014 Jul;8(7):1492-502
pubmed: 24522261
Appl Environ Microbiol. 2007 May;73(10):3189-95
pubmed: 17369331
ISME J. 2019 Jan;13(1):92-103
pubmed: 30116038
Nat Rev Microbiol. 2007 Oct;5(10):782-91
pubmed: 17853906
Environ Microbiol. 2015 Oct;17(10):3822-31
pubmed: 25753990
Proc Natl Acad Sci U S A. 2016 Mar 22;113(12):3143-51
pubmed: 26951682
Appl Environ Microbiol. 2004 Oct;70(10):5875-81
pubmed: 15466527
Nat Methods. 2012 Jul;9(7):671-5
pubmed: 22930834
Appl Environ Microbiol. 2002 Jun;68(6):3094-101
pubmed: 12039771
Appl Environ Microbiol. 1984 Jan;47(1):49-55
pubmed: 6696422
Bioinformatics. 2014 Jul 15;30(14):2068-9
pubmed: 24642063
Environ Microbiol. 2019 Feb;21(2):557-571
pubmed: 30452115
Nat Biotechnol. 2019 Aug;37(8):852-857
pubmed: 31341288
Curr Biol. 2019 May 6;29(9):1528-1535.e6
pubmed: 31031118
Nucleic Acids Res. 2020 Aug 20;48(14):7786-7800
pubmed: 32585009
Nucleic Acids Res. 2018 Jul 2;46(W1):W95-W101
pubmed: 29771380