TSPEAR variants are primarily associated with ectodermal dysplasia and tooth agenesis but not hearing loss: A novel cohort study.


Journal

American journal of medical genetics. Part A
ISSN: 1552-4833
Titre abrégé: Am J Med Genet A
Pays: United States
ID NLM: 101235741

Informations de publication

Date de publication:
08 2021
Historique:
revised: 12 04 2021
received: 21 10 2020
accepted: 22 04 2021
pubmed: 28 5 2021
medline: 13 1 2022
entrez: 27 5 2021
Statut: ppublish

Résumé

Biallelic loss-of-function variants in the thrombospondin-type laminin G domain and epilepsy-associated repeats (TSPEAR) gene have recently been associated with ectodermal dysplasia and hearing loss. The first reports describing a TSPEAR disease association identified this gene is a cause of nonsyndromic hearing loss, but subsequent reports involving additional affected families have questioned this evidence and suggested a stronger association with ectodermal dysplasia. To clarify genotype-phenotype associations for TSPEAR variants, we characterized 13 individuals with biallelic TSPEAR variants. Individuals underwent either exome sequencing or panel-based genetic testing. Nearly all of these newly reported individuals (11/13) have phenotypes that include tooth agenesis or ectodermal dysplasia, while three newly reported individuals have hearing loss. Of the individuals displaying hearing loss, all have additional variants in other hearing-loss-associated genes, specifically TMPRSS3, GJB2, and GJB6, that present competing candidates for their hearing loss phenotype. When presented alongside previous reports, the overall evidence supports the association of TSPEAR variants with ectodermal dysplasia and tooth agenesis features but creates significant doubt as to whether TSPEAR variants are a monogenic cause of hearing loss. Further functional evidence is needed to evaluate this phenotypic association.

Identifiants

pubmed: 34042254
doi: 10.1002/ajmg.a.62347
pmc: PMC8361973
doi:

Substances chimiques

Proteins 0
TSPEAR protein, human 0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

2417-2433

Subventions

Organisme : NHGRI NIH HHS
ID : U01 HG007672
Pays : United States
Organisme : NIDCD NIH HHS
ID : R01 DC012049
Pays : United States
Organisme : NIDCD NIH HHS
ID : R01 DC002842
Pays : United States

Informations de copyright

© 2021 The Authors. American Journal of Medical Genetics Part A published by Wiley Periodicals LLC.

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Auteurs

Bradley Bowles (B)

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.

Alejandro Ferrer (A)

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.

Carla J Nishimura (CJ)

Molecular Otolaryngology and Renal Research Laboratories, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.

Filippo Pinto E Vairo (F)

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Department of Clinical Genomics, Mayo Clinic, Rochester, Minnesota, USA.

Tristan Rey (T)

Faculté de Chirurgie Dentaire, Université de Strasbourg, Strasbourg, France.
Laboratoires de Diagnostic génétique, Pôle de Biologie, Hôpitaux Universitaires de Strasbourg, Institut de Génétique Médicale d'Alsace, Strasbourg, France.
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM U1258, CNRS-UMR7104, Université de Strasbourg, Illkirch, France.

Bruno Leheup (B)

Département de Médecine Infantile, CHRU de Nancy, Nancy, France.

Jennifer Sullivan (J)

Department of Pediatrics, Duke University, Durham, North Carolina, USA.

Kelly Schoch (K)

Department of Pediatrics, Duke University, Durham, North Carolina, USA.

Nicholas Stong (N)

Institute for Genomic Medicine, Columbia University, New York, New York, USA.
Brystol Myers Squibb, New York, New York, USA.

Emanuele Agolini (E)

Laboratory of Medical Genetics, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Dario Cocciadiferro (D)

Laboratory of Medical Genetics, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Abigail Williams (A)

Department of Pediatrics, East Tennessee Children's Hospital, Knoxville, Tennessee, USA.

Alex Cummings (A)

Department of Pediatrics, East Tennessee Children's Hospital, Knoxville, Tennessee, USA.
University of Wisconsin Hospitals and Clinics, Madison, Wisconsin, USA.

Sara Loddo (S)

Laboratory of Medical Genetics, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Silvia Genovese (S)

Laboratory of Medical Genetics, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Chelsea Roadhouse (C)

Department of Pediatrics, McMaster University, Hamilton, Ontario, Canada.

Kirsty McWalter (K)

GeneDx Inc., Gaithersburg, Maryland, USA.

Ingrid M Wentzensen (IM)

GeneDx Inc., Gaithersburg, Maryland, USA.

Chumei Li (C)

Department of Pediatrics, McMaster University, Hamilton, Ontario, Canada.

Dusica Babovic-Vuksanovic (D)

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Department of Clinical Genomics, Mayo Clinic, Rochester, Minnesota, USA.

Brendan C Lanpher (BC)

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Department of Clinical Genomics, Mayo Clinic, Rochester, Minnesota, USA.

Maria Lisa Dentici (ML)

Genetics and Rare Diseases Research Division, Molecular Genetics and Functional Genomics Research Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Arun Ankala (A)

EGL Genetics LLC, Tucker, Georgia, USA.
Emory University School of Medicine, Atlanta, Georgia, USA.

J Austin Hamm (JA)

Department of Pediatrics, East Tennessee Children's Hospital, Knoxville, Tennessee, USA.

Bruno Dallapiccola (B)

Genetics and Rare Diseases Research Division, Molecular Genetics and Functional Genomics Research Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Francesca Clementina Radio (FC)

Genetics and Rare Diseases Research Division, Molecular Genetics and Functional Genomics Research Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Vandana Shashi (V)

Department of Pediatrics, Duke University, Durham, North Carolina, USA.

Benedicte Gérard (B)

Laboratoires de Diagnostic génétique, Pôle de Biologie, Hôpitaux Universitaires de Strasbourg, Institut de Génétique Médicale d'Alsace, Strasbourg, France.

Agnes Bloch-Zupan (A)

Faculté de Chirurgie Dentaire, Université de Strasbourg, Strasbourg, France.
Centre de référence des maladies rares orales et dentaires O-Rares, Filière Santé Maladies rares TETE COU, European Reference Network CRANIO, Pôle de Médecine et Chirurgie Bucco-dentaires, Hôpital Civil, Hôpitaux Universitaires de Strasbourg (HUS), Strasbourg, France.
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM U1258, CNRS-UMR7104, Université de Strasbourg, Illkirch, France.

Richard J Smith (RJ)

Molecular Otolaryngology and Renal Research Laboratories, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.

Eric W Klee (EW)

Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.

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