Biallelic and monoallelic variants in PLXNA1 are implicated in a novel neurodevelopmental disorder with variable cerebral and eye anomalies.


Journal

Genetics in medicine : official journal of the American College of Medical Genetics
ISSN: 1530-0366
Titre abrégé: Genet Med
Pays: United States
ID NLM: 9815831

Informations de publication

Date de publication:
09 2021
Historique:
received: 02 09 2020
accepted: 16 04 2021
revised: 15 04 2021
pubmed: 1 6 2021
medline: 21 10 2021
entrez: 31 5 2021
Statut: ppublish

Résumé

To investigate the effect of PLXNA1 variants on the phenotype of patients with autosomal dominant and recessive inheritance patterns and to functionally characterize the zebrafish homologs plxna1a and plxna1b during development. We assembled ten patients from seven families with biallelic or de novo PLXNA1 variants. We describe genotype-phenotype correlations, investigated the variants by structural modeling, and used Morpholino knockdown experiments in zebrafish to characterize the embryonic role of plxna1a and plxna1b. Shared phenotypic features among patients include global developmental delay (9/10), brain anomalies (6/10), and eye anomalies (7/10). Notably, seizures were predominantly reported in patients with monoallelic variants. Structural modeling of missense variants in PLXNA1 suggests distortion in the native protein. Our zebrafish studies enforce an embryonic role of plxna1a and plxna1b in the development of the central nervous system and the eye. We propose that different biallelic and monoallelic variants in PLXNA1 result in a novel neurodevelopmental syndrome mainly comprising developmental delay, brain, and eye anomalies. We hypothesize that biallelic variants in the extracellular Plexin-A1 domains lead to impaired dimerization or lack of receptor molecules, whereas monoallelic variants in the intracellular Plexin-A1 domains might impair downstream signaling through a dominant-negative effect.

Identifiants

pubmed: 34054129
doi: 10.1038/s41436-021-01196-9
pii: S1098-3600(21)05099-1
pmc: PMC8460429
mid: EMS128249
doi:

Substances chimiques

Nerve Tissue Proteins 0
PLXNA1 protein, human 0
Receptors, Cell Surface 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1715-1725

Subventions

Organisme : NHGRI NIH HHS
ID : UM1 HG008900
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR001863
Pays : United States
Organisme : Medical Research Council
ID : MR/S005021/1
Pays : United Kingdom
Organisme : NHGRI NIH HHS
ID : R01 HG009141
Pays : United States
Organisme : NHGRI NIH HHS
ID : UM1 HG006542
Pays : United States
Organisme : NINDS NIH HHS
ID : R35 NS105078
Pays : United States
Organisme : NHGRI NIH HHS
ID : K08 HG008986
Pays : United States
Organisme : Medical Research Council
ID : MR/S01165X/1
Pays : United Kingdom
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Medical Research Council
ID : G0601943
Pays : United Kingdom

Informations de copyright

© 2021. The Author(s).

Références

Mech Dev. 2003 Feb;120(2):211-8
pubmed: 12559493
Dev Biol. 2012 Jun 15;366(2):195-203
pubmed: 22542598
Neuron. 2012 May 24;74(4):676-90
pubmed: 22632726
Cell. 2019 Feb 7;176(4):729-742.e18
pubmed: 30661757
Gene Expr Patterns. 2018 Jan;27:56-66
pubmed: 29107805
Comput Biol Chem. 2017 Jun;68:153-163
pubmed: 28343125
Curr Protoc Hum Genet. 2017 Oct 18;95:9.31.1-9.31.15
pubmed: 29044468
Hum Mutat. 2015 Oct;36(10):928-30
pubmed: 26220891
Elife. 2013 Oct 01;2:e01279
pubmed: 24137545
Sci Signal. 2012 Jan 17;5(207):ra6
pubmed: 22253263
Nature. 2013 Sep 12;501(7466):217-21
pubmed: 23934111
Am J Hum Genet. 2016 Oct 6;99(4):831-845
pubmed: 27640307
FEBS Lett. 2000 Dec 1;486(1):68-72
pubmed: 11108845
Genome Med. 2016 Jan 06;8(1):3
pubmed: 26739615
Nature. 2014 Feb 13;506(7487):179-84
pubmed: 24463507
Nat Protoc. 2010 Apr;5(4):725-38
pubmed: 20360767
Genet Med. 2019 Apr;21(4):798-812
pubmed: 30655598
Am J Med Genet A. 2017 Jul;173(7):1951-1954
pubmed: 28464511
Cell. 1999 Oct 1;99(1):59-69
pubmed: 10520994
Dev Dyn. 2017 Jul;246(7):539-549
pubmed: 28440030
PLoS One. 2019 Aug 20;14(8):e0221440
pubmed: 31430342
Neurol Genet. 2016 Jan 14;2(1):e51
pubmed: 27066588
Nature. 2014 Jul 17;511(7509):344-7
pubmed: 24896178
J Hum Genet. 2015 Mar;60(3):147-50
pubmed: 25518740
Hum Mutat. 2018 Dec;39(12):1827-1834
pubmed: 30240502
J Comp Neurol. 2016 Feb 15;524(3):518-34
pubmed: 25975775
Sci Rep. 2018 Oct 23;8(1):15647
pubmed: 30353093
Cell. 1999 Oct 1;99(1):71-80
pubmed: 10520995
Cell. 1998 Dec 23;95(7):903-16
pubmed: 9875845
Hum Mol Genet. 2017 Jun 1;26(11):2006-2017
pubmed: 28334861
FEBS J. 2018 Jan;285(1):72-86
pubmed: 29091353
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W529-33
pubmed: 20478830
Neuron. 2006 Dec 7;52(5):775-88
pubmed: 17145500
Am J Hum Genet. 2016 Mar 3;98(3):562-570
pubmed: 26942288
Annu Rev Genomics Hum Genet. 2014;15:195-213
pubmed: 25184530
Nat Commun. 2016 Jul 25;7:12282
pubmed: 27452696
PLoS One. 2011;6(9):e24596
pubmed: 22053218
Neuron. 2016 Aug 3;91(3):548-60
pubmed: 27397516

Auteurs

Gabriel C Dworschak (GC)

Institute of Human Genetics, Medical Faculty, University of Bonn, Bonn, Germany. gabriel.dworschak@uni-bonn.de.
Institute of Anatomy and Cell Biology, Medical Faculty, University of Bonn, Bonn, Germany. gabriel.dworschak@uni-bonn.de.
Department of Pediatrics, University Hospital Bonn, Bonn, Germany. gabriel.dworschak@uni-bonn.de.

Jaya Punetha (J)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

Jeshurun C Kalanithy (JC)

Institute of Human Genetics, Medical Faculty, University of Bonn, Bonn, Germany.
Institute of Anatomy and Cell Biology, Medical Faculty, University of Bonn, Bonn, Germany.

Enrico Mingardo (E)

Institute of Human Genetics, Medical Faculty, University of Bonn, Bonn, Germany.
Institute of Anatomy and Cell Biology, Medical Faculty, University of Bonn, Bonn, Germany.

Haktan B Erdem (HB)

Department of Medical Genetics, University of Health Sciences, Diskapi Yildirim Beyazit Training and Research Hospital, Ankara, Turkey.

Zeynep C Akdemir (ZC)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.

Ender Karaca (E)

Department of Genetics, University of Alabama at Birmingham, Birmingham, AL, USA.

Tadahiro Mitani (T)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.

Dana Marafi (D)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.

Jawid M Fatih (JM)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.

Shalini N Jhangiani (SN)

Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.

Jill V Hunter (JV)

Department of Radiology, Baylor College of Medicine, Houston, TX, USA.

Tikam Chand Dakal (TC)

Genome and Computational Biology Lab, Department of Biotechnology, Mohanlal Sukhadia University, Udaipur, Rajasthan, India.

Bhanupriya Dhabhai (B)

Genome and Computational Biology Lab, Department of Biotechnology, Mohanlal Sukhadia University, Udaipur, Rajasthan, India.

Omar Dabbagh (O)

Department of Neuroscience, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.

Hessa S Alsaif (HS)

Department of Genetics, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia.

Fowzan S Alkuraya (FS)

Department of Genetics, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia.
Department of Anatomy and Cell Biology, College of Medicine, Alfaisal University, Riyadh, Saudi Arabia.

Reza Maroofian (R)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom.

Henry Houlden (H)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom.

Stephanie Efthymiou (S)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom.

Natalia Dominik (N)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom.

Vincenzo Salpietro (V)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom.

Tipu Sultan (T)

Department of Pediatric Neurology, Institute of Child Health, The Children's Hospital Lahore, Lahore, Pakistan.

Shahzad Haider (S)

Department of Paediatric Medicine, Wah Medical College, Rawalpindi, Pakistan.

Farah Bibi (F)

University Institute of Biochemistry & Biotechnology, PMAS - Arid Agriculture University, Rawalpindi, Pakistan.

Holger Thiele (H)

Cologne Center for Genomics, University of Cologne, Cologne, Germany.

Julia Hoefele (J)

Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.

Korbinian M Riedhammer (KM)

Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.
Department of Nephrology, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.

Matias Wagner (M)

Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.
Institute of Human Genetics, Helmholtz Zentrum München, Neuherberg, Germany.
Institute of Neurogenomics, Helmholtz Zentrum München, Neuherberg, Germany.

Ilaria Guella (I)

Department of Medical Genetics, Centre for Applied Neurogenetics, University of British Columbia, Vancouver, BC, Canada.

Michelle Demos (M)

Division of Neurology, Department of Pediatrics, University of British Columbia and BC Children's Hospital, Vancouver, BC, Canada.

Boris Keren (B)

AP-HP, Hôpital Pitié-Salpêtrière, Département de Génétique, Paris, France.

Julien Buratti (J)

AP-HP, Hôpital Pitié-Salpêtrière, Département de Génétique, Paris, France.

Perrine Charles (P)

AP-HP, Hôpital Pitié-Salpêtrière, Département de Génétique, Paris, France.

Caroline Nava (C)

AP-HP, Hôpital Pitié-Salpêtrière, Département de Génétique, Paris, France.
Institut du Cerveau et de la Moelle épinière, Sorbonne Université, UMR S 1127, Inserm U1127, CNRS UMR 7225, Paris, France.

Delphine Héron (D)

AP-HP, Hôpital Pitié-Salpêtrière, Département de Génétique, Paris, France.

Solveig Heide (S)

AP-HP, Hôpital Pitié-Salpêtrière, Département de Génétique, Paris, France.

Elise Valkanas (E)

Center for Mendelian Genomics, The Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA.

Leigh B Waddell (LB)

Kids Neuroscience Centre, Kids Research, The Children's Hospital at Westmead, Sydney, NSW, Australia.
Discipline of Child and Adolescent Health, Sydney Medical School, University of Sydney, Sydney, NSW, Australia.

Kristi J Jones (KJ)

Kids Neuroscience Centre, Kids Research, The Children's Hospital at Westmead, Sydney, NSW, Australia.
Discipline of Child and Adolescent Health, Sydney Medical School, University of Sydney, Sydney, NSW, Australia.

Emily C Oates (EC)

Kids Neuroscience Centre, Kids Research, The Children's Hospital at Westmead, Sydney, NSW, Australia.
School of Biotechnology and Biomolecular Sciences, Faculty of Science, The University of New South Wales, Sydney, NSW, Australia.

Sandra T Cooper (ST)

Kids Neuroscience Centre, Kids Research, The Children's Hospital at Westmead, Sydney, NSW, Australia.
Discipline of Child and Adolescent Health, Sydney Medical School, University of Sydney, Sydney, NSW, Australia.
Children's Medical Research Institute, Westmead, NSW, Australia.

Daniel MacArthur (D)

Broad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, MA, USA.
Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.
Harvard Medical School, Boston, MA, USA.

Steffen Syrbe (S)

Division of Pediatric Epileptology, Centre for Paediatrics and Adolescent Medicine, University Hospital Heidelberg, Heidelberg, Germany.

Andreas Ziegler (A)

Division of Pediatric Neurology and Metabolic Medicine, Centre for Pediatrics and Adolescent Medicine, University Hospital Heidelberg, Heidelberg, Germany.

Konrad Platzer (K)

Institute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.

Volkan Okur (V)

Department of Pediatrics, Columbia University, New York, NY, USA.

Wendy K Chung (WK)

Department of Pediatrics, Columbia University, New York, NY, USA.

Sarah A O'Shea (SA)

Department of Neurology, Columbia University, New York, NY, USA.

Roy Alcalay (R)

Department of Neurology, Columbia University, New York, NY, USA.

Stanley Fahn (S)

Department of Neurology, Columbia University, New York, NY, USA.

Paul R Mark (PR)

Division of Medical Genetics, Helen DeVos Children's Hospital Grand Rapids, New York, MI, USA.

Renzo Guerrini (R)

Neuroscience Department, Children's Hospital A. Meyer-University of Florence, Florence, Italy.

Annalisa Vetro (A)

Neuroscience Department, Children's Hospital A. Meyer-University of Florence, Florence, Italy.

Beth Hudson (B)

GeneDx, Gaithersburg, MD, USA.

Rhonda E Schnur (RE)

GeneDx, Gaithersburg, MD, USA.

George E Hoganson (GE)

Department of Pediatrics, University of Illinois, College of Medicine, Chicago, IL, USA.

Jennifer E Burton (JE)

Department of Pediatrics, University of Illinois, College of Medicine, Peoria, IL, USA.

Meriel McEntagart (M)

South West Thames Regional Genetics Centre, St. George's Healthcare NHS Trust, St. George's, University of London, London, United Kingdom.

Tobias Lindenberg (T)

Institute of Neuroanatomy, Medical Faculty, University of Bonn, Bonn, Germany.

Öznur Yilmaz (Ö)

Institute of Anatomy and Cell Biology, Medical Faculty, University of Bonn, Bonn, Germany.

Benjamin Odermatt (B)

Institute of Anatomy and Cell Biology, Medical Faculty, University of Bonn, Bonn, Germany.
Institute of Neuroanatomy, Medical Faculty, University of Bonn, Bonn, Germany.

Davut Pehlivan (D)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Section of Neurology, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA.

Jennifer E Posey (JE)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.

James R Lupski (JR)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.
Texas Children's Hospital, Houston, TX, USA.
Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA.

Heiko Reutter (H)

Institute of Human Genetics, Medical Faculty, University of Bonn, Bonn, Germany.
Department of Neonatology and Pediatric Intensive Care, University Hospital Bonn, Bonn, Germany.

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