Metabolomics reveals synergy between Ag and g-C
Biocide
Charge carrier species
Metabolomics
Photocatalysis
Journal
Metabolomics : Official journal of the Metabolomic Society
ISSN: 1573-3890
Titre abrégé: Metabolomics
Pays: United States
ID NLM: 101274889
Informations de publication
Date de publication:
01 06 2021
01 06 2021
Historique:
received:
18
02
2021
accepted:
24
05
2021
entrez:
1
6
2021
pubmed:
2
6
2021
medline:
15
1
2022
Statut:
epublish
Résumé
The silver/graphitic carbon nitride (Ag/g-C We investigated the chemical (cooperative charge handling and electronic properties) and biological (metabolic) effects exerted by the addition of Ag to g-C In this work, we undertook metabolome-wide analysis by liquid chromatography-electrospray ionization-quadrupole-time of flight-mass spectrometry to compare the metabolite profiles of untreated E. coli 1337-H cells or those subjected to disinfection with Ag, g-C While Ag or g-C Our results support the idea that the unique Ag/g-C
Identifiants
pubmed: 34061256
doi: 10.1007/s11306-021-01804-4
pii: 10.1007/s11306-021-01804-4
doi:
Substances chimiques
Silver
3M4G523W1G
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
53Références
Aubron, C., Glodt, J., Matar, C., Huet, O., Borderie, D., Dobrindt, U., et al. (2012). Variation in endogenous oxidative stress in Escherichia coli natural isolates during growth in urine. BMC Microbiology, 12, 120. https://doi.org/10.1186/1471-2180-12-120
doi: 10.1186/1471-2180-12-120
pubmed: 22727065
pmcid: 3479029
Birben, E., Sahiner, U. M., Sackesen, C., Erzurum, S., & Kalayci, O. (2012). Oxidative stress and antioxidant defense. World Allergy Organization Journal, 5, 9–19. https://doi.org/10.1097/WOX.0b013e3182439613
doi: 10.1097/WOX.0b013e3182439613
Cruz-Ortíz, B., Hamilton, J. W. J., Pablos, C., Díza-Jiménez, C., Cortés-Hernández, D. A., Sharma, P. K., et al. (2017). Mechanism of photocatalytic disinfection using titania-graphene composites under UV and visible irradiation. Chemical Engineering Journal, 316, 179–186. https://doi.org/10.1016/j.cej.2017.01.094
doi: 10.1016/j.cej.2017.01.094
Endo, M., Wei, Z., Wang, K., Karabiyik, B., Yoshiiri, K., Rokicka, P., et al. (2018). Noble metal-modified titania with visible-light activity for the decomposition of microorganisms. Beilstein Journal of Nanotechnology, 9, 829–841. https://doi.org/10.3762/bjnano.9.77
doi: 10.3762/bjnano.9.77
pubmed: 29600144
pmcid: 5852454
Ferrer, M., Raczkowska, B. A., Martínez-Martínez, M., Barbas, C., & Rojo, D. (2017). Phenotyping of gut microbiota: Focus on capillary electrophoresis. Electrophoresis, 38, 2275–2286.
doi: 10.1002/elps.201700056
Foster, H. A., Ditta, I. B., Varghese, S., & Steele, A. (2011). Photocatalytic disinfection using titanium dioxide: spectrum and mechanism of antimicrobial activity. Applied Microbiology and Biotechnology, 90, 1847–1868. https://doi.org/10.1007/s00253-011-3213-7
doi: 10.1007/s00253-011-3213-7
pubmed: 21523480
pmcid: 7079867
Godzien, J., Alonso-Herranz, V., Barbas, C., & Armitage, E. C. (2015). Controlling the quality of metabolomics data: new strategies to get the best out of the QC sample. Metabolomics, 11, 518–528. https://doi.org/10.1007/s11306-014-0712-4
doi: 10.1007/s11306-014-0712-4
Gogniat, G., & Dukan, S. (2007). TiO
doi: 10.1128/AEM.01079-07
pubmed: 17933934
pmcid: 2168052
González-Riano, C., Dudzik, D., Garcia, A., Gil-de-la-Fuente, A., Gradillas, A., Godzien, J., López-Gonzálvez, Á., Rey-Stolle, F., Rojo, D., Ruperez, F. J., Saiz, J., & Barbas, C. (2020). Recent Developments along the analytical process for metabolomics workflows. Analytical Chemistry, 92, 203–226. https://doi.org/10.1021/acs.analchem.9b04553
doi: 10.1021/acs.analchem.9b04553
pubmed: 31625723
Guo, A. C., Jewison, T., Wilson, M., Liu, Y., Knox, C., Djoumbou, Y., et al. (2013). ECMDB: The E. coli metabolome database. Nucleic Acids Research. https://doi.org/10.1093/nar/gks992
doi: 10.1093/nar/gks992
pubmed: 24343027
pmcid: 3950701
Guo, J. R., Li, Z., Wang, C. Y., Kei Lam, C. W., Chen, Q. Q., Zhang, W. J., et al. (2017). Profiling of ribonucleotides and deoxyribonucleotides pools in response to DNA damage and repair induced by methyl methanesulfonate in cancer and normal cells. Oncotarget, 8, 101707–101719.
doi: 10.18632/oncotarget.21521
Haug, K., Cochrane, K., Nainala, V. C., Williams, M., Chang, J., Jayaseelan, K. V., & O’Donovan, C. (2020). MetaboLights: A resource evolving in response to the needs of its scientific community. Nucleic Acids Research, 48, D440–D444. https://doi.org/10.1093/nar/gkz1019
doi: 10.1093/nar/gkz1019
pubmed: 31691833
Hu, C., Guo, J., Qu, J., & Hu, X. (2007). Photocatalytic degradation of pathogenic bacteria with AgI/TiO
doi: 10.1021/la063626x
Kapoore, R. V., & Vaidyanathan, S. (2016). Towards quantitative mass spectrometry-based metabolomics in microbial and mammalian systems. Philosophical Transactions of the Royal Society A, 374, 20150363. https://doi.org/10.1098/rsta.2015.0363
doi: 10.1098/rsta.2015.0363
Kiwi, J., & Nadtochenko, V. (2005). Evidence for the mechanism of photocatalytic degradation of the bacterial wall membrane at the TiO
doi: 10.1021/la046983l
pubmed: 16032882
Kubacka, A., Ferrer, M., Martínez-Arias, A., & Fernández García, M. (2008). Ag promotion of TiO
doi: 10.1016/j.apcatb.2008.02.020
Kubacka, A., Muñoz-Batista, M. J., Ferrer, M., & Fernández-García, M. (2013). UV and visible light optimization of anatase TiO
doi: 10.1016/j.apcatb.2013.04.077
Kubacka, A., Muñoz-Batista, M. J., Ferrer, M., & Fernández-Garcia, M. (2018). Er-W codoping of TiO
doi: 10.1016/j.apcatb.2018.01.064
Kubacka, A., Suárez-Díaz, M., Rojo, D., Bargiela, R., Ciordia, S., Zapico, I., et al. (2014). Understanding the antimicrobial mechanism of TiO
doi: 10.1038/srep04134
pubmed: 24549289
pmcid: 3928576
Ledesma-Amaro, R., Buey, R. M., & Revuelta, J. L. (2015). Increased production of inosine and guanosine by means of metabolic engineering of the purine pathway in Ashbya gossypii. Microbial Cell Factories, 14, 58. https://doi.org/10.1186/s12934-015-0234-4
doi: 10.1186/s12934-015-0234-4
pubmed: 25889888
pmcid: 4407346
Leonardi, R., & Jackowski, S. (2007). Biosynthesis of Pantothenic Acid and Coenzyme A. EcoSal plus. https://doi.org/10.1128/ecosalplus.3.6.3.4
doi: 10.1128/ecosalplus.3.6.3.4
pubmed: 26443589
pmcid: 4950986
Leung, Y. H., Xu, X., Ma, A. P. Y., Liu, F., Ng, A. M. C., Shen, Z., et al. (2016). Leung, Toxicity of ZnO and TiO
doi: 10.1038/srep35243
pubmed: 27731373
pmcid: 5378928
Li, P., Li, J., Feng, X., Li, J., Hao, Y., Zhang, J., et al. (2019). Metal-organic frameworks with photocatalytic bactericidal activity for integrated air cleaning. Nature Communications, 10, 2177. https://doi.org/10.1038/s41467-019-10218-9
doi: 10.1038/s41467-019-10218-9
pubmed: 31097709
pmcid: 6522529
Liang, J. Y., Cheng, C. W., Yu, C. H., & Chen, L. Y. (2015). Investigations of blue light-induced reactive oxygen species from flavin mononucleotide on inactivation of E. coli. The Journal of Photochemistry and Photobiology B, 143, 82–88. https://doi.org/10.1016/j.jphotobiol.2015.01.005
doi: 10.1016/j.jphotobiol.2015.01.005
Liebeke, M., Dörries, K., Meyer, H., & Lalk, M. (2012). Metabolome analysis of gram-positive bacteria such as Staphylococcus aureus by GC-MS and LC-MS. Methods in Molecular Biology, 815, 377–398. https://doi.org/10.1007/978-1-61779-424-7_28
doi: 10.1007/978-1-61779-424-7_28
pubmed: 22131006
Lok, C.-N., Ho, C.-M., Chen, R., He, Q.-Y., Yu, W.-Y., Sun, H., et al. (2006). Proteomic analysis of the mode of antibacterial action of silver nanoparticles. Journal of Proteome Research, 5, 916–924. https://doi.org/10.1021/pr0504079
doi: 10.1021/pr0504079
pubmed: 16602699
Mamba, G., & Mishra, A. K. (2016). Graphitic carbon nitride (g-C
doi: 10.1016/j.apcatb.2016.05.052
Matsumaga, T., Tomada, R., Nakajima, T., & Wake, H. (1985). Photoelectrochemical sterilization of microbial cells by semiconductor powders. FEBS Microbiology Letters, 29, 211–214. https://doi.org/10.1111/j.1574-6968.1985.tb00864.x
doi: 10.1111/j.1574-6968.1985.tb00864.x
Morollo, A. A., & Bauerle, R. (1993). Characterization of composite aminodeoxyisochorismate synthase and aminodeoxyisochorismate lyase activities of anthranilate synthase. Proceedings of the National Academy of Sciences of the United States of America, 90, 9983–9987. https://doi.org/10.1073/pnas.90.21.9983
doi: 10.1073/pnas.90.21.9983
pubmed: 8234345
pmcid: 47697
Moya, A., & Ferrer, M. (2016). Functional redundancy-induced stability of gut microbiota subjected to disturbance. Trends in Microbiology, 24, 402–413. https://doi.org/10.1016/j.tim.2016.02.002
doi: 10.1016/j.tim.2016.02.002
pubmed: 26996765
Muñoz-Batista, M. J., Ferrer, M., Fernández-García, M., & Kubacka, A. (2014). Abatement of organics and Escherichia coli using CeO
doi: 10.1016/j.apcatb.2014.02.038
Muñoz-Batista, M. J., Fontelles-Carceller, O., Ferrer, M., Fernández-García, M., & Kubacka, A. (2016). Disinfection capability of Ag/g-C
doi: 10.1016/j.apcatb.2015.10.024
Murugesan, P., Moses, J. A., & Anandharamakrishnan, C. (2019). Photocatalytic disinfection efficiency of 2D structure graphitic carbon nitride-based nanocomposites: a review. Journal of Materials Science, 54, 12206–12235. https://doi.org/10.1007/s10853-019-03695-2
doi: 10.1007/s10853-019-03695-2
Nosaka, Y., & Nosaka, A. Y. (2017). Generation and detection of reactive oxygen species in photocatalysis. Chemical Reviews, 117, 11302–11336. https://doi.org/10.1021/acs.chemrev.7b00161
doi: 10.1021/acs.chemrev.7b00161
pubmed: 28777548
Rojo, D., Gosalbes, M. J., Ferrari, R., Pérez-Cobas, A. E., Hernández, E., Oltra, R., Buesa, J., Latorre, A., Barbas, C., Ferrer, M., & Moya, A. (2015). Clostridium difficile heterogeneously impacts intestinal community architecture but drives stable metabolome responses. The ISME Journal, 9, 2206–2220. https://doi.org/10.1038/ismej.2015.32
doi: 10.1038/ismej.2015.32
pubmed: 25756679
pmcid: 4579473
Schwarz-Linek, J., Arlt, J., Jepson, A., Dawson, A., Vissers, T., Dario Miroli, T., et al. (2016). Escherichia coli as a model active colloid: A practical introduction. Colloids and Surfaces B: Biointerfaces, 137, 2–16. https://doi.org/10.1016/j.colsurfb.2015.07.048
doi: 10.1016/j.colsurfb.2015.07.048
pubmed: 26310235
Wang, W., Huang, G., Yu, J. C., & Wong, P. K. (2015). Advances in photocatalytic disinfection of bacteria: development of photocatalysts and mechanisms. Journal of Environmental Sciences (china), 34, 232–247. https://doi.org/10.1016/j.jes.2015.05.003
doi: 10.1016/j.jes.2015.05.003
Xu, J., Wang, Z., & Zhu, Y. (2017). Enhanced visible-light-driven photocatalytic disinfection performance and organic pollutant degradation activity of porous g-C
doi: 10.1021/acsami.7b07657
Zaritsky, A., Woldringh, C. L., Einav, M., & Alexeeva, S. (2006). Use of thymine limitation and thymine starvation to study bacterial physiology and cytology. Journal of Bacteriology, 188, 1667–1679. https://doi.org/10.1128/JB.188.5.1667-1679.2006
doi: 10.1128/JB.188.5.1667-1679.2006
pubmed: 16484178
pmcid: 1426543
Zhang, C., Li, Y., Shuai, D., Shen, Y., Xiong, W., & Wang, L. (2019). Graphitic carbon nitride (g-C
doi: 10.1016/j.chemosphere.2018.09.137
pubmed: 30273880