Diversity and Reassortment Rate of Influenza A Viruses in Wild Ducks and Gulls.
avian influenza
diversity
reassortment
Journal
Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722
Informations de publication
Date de publication:
27 05 2021
27 05 2021
Historique:
received:
29
04
2021
revised:
22
05
2021
accepted:
24
05
2021
entrez:
2
6
2021
pubmed:
3
6
2021
medline:
15
12
2021
Statut:
epublish
Résumé
Influenza A viruses (IAVs) evolve via point mutations and reassortment of viral gene segments. The patterns of reassortment in different host species differ considerably. We investigated the genetic diversity of IAVs in wild ducks and compared it with the viral diversity in gulls. The complete genomes of 38 IAVs of H1N1, H1N2, H3N1, H3N2, H3N6, H3N8, H4N6, H5N3, H6N2, H11N6, and H11N9 subtypes isolated from wild mallard ducks and gulls resting in a city pond in Moscow, Russia were sequenced. The analysis of phylogenetic trees showed that stable viral genotypes do not persist from year to year in ducks owing to frequent gene reassortment. For comparison, similar analyses were carried out using sequences of IAVs isolated in the same period from ducks and gulls in The Netherlands. Our results revealed a significant difference in diversity and rates of reassortment of IAVs in ducks and gulls.
Identifiants
pubmed: 34072256
pii: v13061010
doi: 10.3390/v13061010
pmc: PMC8230314
pii:
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Références
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
J Virol. 2005 Mar;79(5):2814-22
pubmed: 15709000
Virology. 2013 Aug 15;443(1):150-60
pubmed: 23725694
Arch Virol. 1991;116(1-4):261-5
pubmed: 1848066
J Virol. 2012 Mar;86(5):2706-14
pubmed: 22205751
Avian Dis. 2007 Mar;51(1 Suppl):440-7
pubmed: 17494603
Avian Dis. 2007 Mar;51(1 Suppl):242-9
pubmed: 17494560
PLoS Pathog. 2008 Aug 22;4(8):e1000133
pubmed: 18725925
J Clin Microbiol. 1983 Aug;18(2):425-7
pubmed: 6619292
Emerg Microbes Infect. 2019;8(1):1456-1464
pubmed: 31603050
J Gen Virol. 2018 Jan;99(1):3-16
pubmed: 29244017
J Virol. 2018 Jul 17;92(15):
pubmed: 29769347
Nature. 2008 May 29;453(7195):615-9
pubmed: 18418375
PLoS Pathog. 2008 May 30;4(5):e1000076
pubmed: 18516303
Science. 2006 Apr 21;312(5772):384-8
pubmed: 16627734
Vaccine. 2009 Oct 23;27(45):6340-4
pubmed: 19840670
Nature. 2014 Apr 10;508(7495):254-7
pubmed: 24531761
Curr Top Microbiol Immunol. 2014;385:377-401
pubmed: 25007845
Zentralbl Veterinarmed B. 1978 Dec;25(10):853-7
pubmed: 217205
Virus Res. 2006 Dec;122(1-2):200-5
pubmed: 16971014
Virol J. 2013 Jun 06;10:179
pubmed: 23742717
Virus Genes. 1995;11(2-3):209-15
pubmed: 8828147
Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9654-8
pubmed: 10920197
Virus Res. 2008 Mar;132(1-2):33-41
pubmed: 18054811
Euro Surveill. 2015 Mar 26;20(12):
pubmed: 25846491
J Virol. 2017 Aug 10;91(17):
pubmed: 28637755
Virol J. 2012 Oct 11;9:233
pubmed: 23057530
J Virol Methods. 2007 Jun;142(1-2):218-22
pubmed: 17324474
J Clin Microbiol. 2006 Mar;44(3):1123-6
pubmed: 16517910
Virology. 2018 Sep;522:37-45
pubmed: 30014856
Virology. 1989 Sep;172(1):180-8
pubmed: 2773315
J Virol. 2015 Aug;89(16):8453-61
pubmed: 26041285
PLoS Genet. 2014 Jan;10(1):e1004037
pubmed: 24415946
PLoS Pathog. 2008 Feb 29;4(2):e1000012
pubmed: 18463694
Emerg Infect Dis. 2014 Jan;20(1):138-41
pubmed: 24377955
Biochem Biophys Res Commun. 2009 Aug 21;386(2):278-83
pubmed: 19460353
BMC Evol Biol. 2007 Nov 08;7:214
pubmed: 17996036
J Virol. 2020 Jun 16;94(13):
pubmed: 32321814
Influenza Other Respir Viruses. 2014 Nov;8(6):646-53
pubmed: 25363159
J Virol. 2010 Aug;84(16):7953-60
pubmed: 20519405
Virol J. 2019 Jun 26;16(1):85
pubmed: 31242907
J Gen Virol. 2003 Sep;84(Pt 9):2285-2292
pubmed: 12917448
Infect Genet Evol. 2014 Dec;28:130-6
pubmed: 25239729
Proc Natl Acad Sci U S A. 2016 Aug 9;113(32):9033-8
pubmed: 27457948
Crit Rev Microbiol. 2015;41(4):508-19
pubmed: 24450609
PLoS Pathog. 2013;9(6):e1003421
pubmed: 23785286
J Virol. 2014 Mar;88(5):2844-57
pubmed: 24371052
Cold Spring Harb Perspect Med. 2020 Jul 1;10(7):
pubmed: 31871237
Virology. 1998 May 10;244(2):315-21
pubmed: 9601502
PLoS Biol. 2005 Sep;3(9):e300
pubmed: 16026181
Microbiol Rev. 1992 Mar;56(1):152-79
pubmed: 1579108
PLoS Pathog. 2015 Oct 06;11(10):e1005204
pubmed: 26440404
Virus Res. 2000 Jun;68(1):71-85
pubmed: 10930664
PLoS Pathog. 2017 Nov 7;13(11):e1006685
pubmed: 29112968
Viruses. 2020 Sep 20;12(9):
pubmed: 32962203