Polymer monoliths for the concentration of viruses from environmental waters: A review.


Journal

Journal of separation science
ISSN: 1615-9314
Titre abrégé: J Sep Sci
Pays: Germany
ID NLM: 101088554

Informations de publication

Date de publication:
Jan 2022
Historique:
revised: 09 06 2021
received: 06 04 2021
accepted: 10 06 2021
pubmed: 16 6 2021
medline: 16 3 2022
entrez: 15 6 2021
Statut: ppublish

Résumé

Even at low concentrations in environmental waters, some viruses are highly infective, making them a threat to human health. They are the leading cause of waterborne enteric diseases. In agriculture, plant viruses in irrigation and runoff water threat the crops. The low concentrations pose a challenge to early contamination detection. Thus, concentrating the virus particles into a small volume may be mandatory to achieve reliable detection in molecular techniques. This paper reviews the organic monoliths developments and their applications to concentrate virus particles from waters (waste, surface, tap, sea, and irrigation waters). Free-radical polymerization and polyaddition reactions are the most common strategies to prepare the monoliths currently used for virus concentration. Here, the routes for preparing and functionalizing both methacrylate and epoxy-based monoliths will be shortly described, following a revision of their retention mechanisms and applications in the concentration of enteric and plant viruses in several kinds of waters.

Identifiants

pubmed: 34128332
doi: 10.1002/jssc.202100282
doi:

Substances chimiques

Polymers 0
Waste Water 0

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

134-148

Informations de copyright

© 2021 Wiley-VCH GmbH.

Références

Bosch A, Guix S, Sano D, Pintó RM. New tools for the study and direct surveillance of viral pathogens in water. Curr Opin Biotechnol. 2008;19:295-301.
Koenig R. Plant viruses in rivers and lakes. Adv Virus Res. 1986;31:321-33.
Mehle N, Ravnikar M. Plant viruses in aqueous environment-Survival, water mediated transmission and detection. Water Res. 2012;46:4902-17.
Mehle N, Kogovšek P, Rački N, Jakomin T, Gutiérrez-Aguirre I, Kramberger P, Ravnikar M. Filling the gaps in diagnostics of Pepino mosaic virus and Potato spindle tuber viroid in water and tomato seeds and leaves. Plant Pathol. 2017;66:1191-201.
Gutiérrez-Aguirre I, Steyer A, Boben J, Gruden K, Poljšak-Prijatelj M, Ravnikar M. Sensitive detection of multiple rotavirus genotypes with a single reverse transcription-real-time quantitative PCR assay. J. Clin. Microbiol. 2008;46:2547-54.
Gutiérrez-Aguirre I, Banjac M, Steyer A, Poljšak-Prijatelj M, Peterka M, Štrancar A, Ravnikar M. Concentrating rotaviruses from water samples using monolithic chromatographic supports. J. Chromatogr. A. 2009;1216:2700-4.
Ahmed W, Kitajima M, Tandukar S, Haramoto E. Recycled water safety: current status of traditional and emerging viral indicators. Curr. Opin. Environ. Sci. Heal. 2020;16:62-72.
World Health Organization. Guidelines for drinking-water quality, incorporating the 1st addendum. 4th ed. Geneva, CH: WHO; 2017.
Sodré FF, Brandão CCS, Vizzotto CS, Maldaner EAO. Wastewater-based epidemiology as a strategy for community monitoring, mapping of hotspots and early warning systems of COVID-19. Quim. Nova. 2020;43:515-9.
La G, Bonadonna L, Lucentini L, Kenmoe S, Suffredini E. Coronavirus in water environments : Occurrence, persistence and concentration methods-A scoping review. Water Res. 2020;179, 115899.
Ahmed W, Tscharke B, Bertsch PM, Bibby K, Bivins A, Choi P, Clarke L, Dwyer J, Edson J, Nguyen TMH, O'Brien JW, Simpson SL, Sherman P, Thomas KV, Verhagen R, Zaugg J, Mueller JF. SARS-CoV-2 RNA monitoring in wastewater as a potential early warning system for COVID-19 transmission in the community: A temporal case study. Sci. Total Environ. 2021;761, 144216.
Bosch A, Sánchez G, Abbaszadegan M, Carducci A, Guix S, Le Guyader FS, Netshikweta R, Pintó RM, van der Poel WHM, Rutjes S, Sano D, Taylor MB, van Zyl WB, Rodríguez-Lázaro D, Kovač K, Sellwood J. Analytical methods for virus detection in water and food. Food Anal. Methods. 2011;4:4-12.
Haramoto E, Kitajima M, Hata A, Torrey JR, Masago Y, Sano D, Katayama H. A review on recent progress in the detection methods and prevalence of human enteric viruses in water. Water Res. 2018;135:168-86.
Cashdollar JL, Wymer L. Methods for primary concentration of viruses from water samples: A review and meta-analysis of recent studies. J. Appl. Microbiol. 2013;115:1-11.
Ikner LA, Gerba CP, Bright KR. Concentration and recovery of viruses from water: A comprehensive review. Food Environ. Virol. 2012;4:41-67.
Matrajt G, Naughton B, Bandyopadhyay AS, Meschke JS. A review of the most commonly used methods for sample collection in environmental surveillance of poliovirus. Clin. Infect. Dis. 2018;67:S90-7.
Bofill-Mas S, Rusiñol M. Recent trends on methods for the concentration of viruses from water samples. Curr. Opin. Environ. Sci. Heal. 2020;16:7-13.
Hjelmsø MH, Hellmér M, Fernandez-Cassi X, Timoneda N, Lukjancenko O, Seidel M, Elsässer D, Aarestrup FM, Löfström C, Bofill-Mas S, Abril JF, Girones R, Schultz AC. Evaluation of methods for the concentration and extraction of viruses from sewage in the context of metagenomic sequencing. PLoS One. e0170199, 2017;12, https://doi.org/10.1371/journal.pone.0170199.
Krajacic M, Ravnikar M, Štrancar A, Gutiérrez-Aguirre I. Application of monolithic chromatographic supports in virus research. Electrophoresis 2017;38:2827-36.
Gelderblom HR. Structure and classification of viruses. In: Baron S, editors. Medical microbiology. Gavelston, TX: University of Texas Medical Branch at Galveston; 2006. p. 1-7.
Brum MCS, Weiblen R. Detecção, identificação e quantificação de vírus. In: Flores EF, Virologia V, (Eds.). Virologia Veterinária. Editora da Universidade Federal de Santa Maria, Santa Maria, RS, Brasil, 2007, p. 61-86.
Bu J, Deng Z, Liu H, Li J, Wang D, Yang Y, Zhong S. Current methods and prospects of coronavirus detection. Talanta 2021;225, 121977.
Chen L, Zhang G, Liu L, Li Z. Emerging biosensing technologies for improved diagnostics of COVID-19 and future pandemics. Talanta 2021;225, 121986.
Gularte JS, de Oliveira Hansen R, Demoliner M, Fiutowski J, Eisen AKA, Heldt FH, de Almeida PR, Müller de Quevedo D, Rubahn HG, Spilki FR. Functionalized surfaces as a tool for virus sensing: A demonstration of human mastadenovirus detection in environmental waters. Chemosensors 2021;9:1-17.
Farkas K, Walker DI, Adriaenssens EM, McDonald JE, Hillary LS, Malham SK, Jones DL. Viral indicators for tracking domestic wastewater contamination in the aquatic environment. Water Res. 2020;181, 115926.
Farkas K, Mannion F, Hillary LS, Malham SK, Walker DI. Emerging technologies for the rapid detection of enteric viruses in the aquatic environment. Curr. Opin. Environ. Sci. Heal. 2020;16:1-6.
Kramberger P, Petrovič N, Štrancar A, Ravnikar M. Concentration of plant viruses using monolithic chromatographic supports. J. Virol. Methods. 2004;120:51-7.
Gutiérrez-Aguirre I, Steyer A, Banjac M, Kramberger P, Poljšak-Prijatelj M, Ravnikar M. On-site reverse transcription-quantitative polymerase chain reaction detection of rotaviruses concentrated from environmental water samples using methacrylate monolithic supports. J. Chromatogr. A. 2011;1218:2368-73.
Kralik P, Ricchi M. A basic guide to real time PCR in microbial diagnostics: Definitions, parameters, and everything. Front. Microbiol. 2017;8:1-9.
Branovic K, Forcic D, Ivancic J, Strancar A, Barut M, Kosutic-Gulija T, Zgorelec R, Mazuran R. Application of short monolithic columns for improved detection of viruses. J. Virol. Methods. 2003;110:163-71.
Gutiérrez-aguirre I, Kutnjak D, Ra N, Rupar M. In: Pantaleo V., Chiumenti M, editors. Viral metagenomics: methods and protocols, methods in molecular biology. Berlin, GE: Springer; 2018. p. 63-75.
Guimarães FR, Ferreira FFM, Vieira CB, Fumian TLM, Shubo T, Leite JPG, Miagostovich MP. Molecular detection of human astrovirus in an urban sewage treatment plant in Rio de Janeiro, Brazil. Mem. Inst. Oswaldo Cruz. 2008;103:819-23.
Hata A, Inaba M, Katayama H, Furumai H. Characterization of natural organic substances potentially hindering RT-PCR-based virus detection in large volumes of environmental water. Environ. Sci. Technol. 2017;51:13568-79.
Shi H, Pasco EV, Tarabara VV. Membrane-based methods of virus concentration from water: A review of process parameters and their effects on virus recovery. Environ. Sci. Water Res. Technol. 2017;3:778-92.
Fout GS, Dahling DR, Safferman SR Concentration and processing of waterborne viruses by positive charge 1MDS cartridge filters and organic flocculation. In: USEPA manual of methods for virology, EPA 600/4-84/013 (N14). Washington, DC: U.S. Environmental Protection Agency; 2001. p. 13.
Guiochon G. Monolithic columns in high-performance liquid chromatography. J. Chromatogr. A. 2007;1168:101-68.
Svec F, Huber CG. Monolithic materials: Promises, challenges, achievements. Anal. Chem. 2006;78:2100-7.
Trilisky EI, Lenhoff AM. Flow-dependent entrapment of large bioparticles in porous process media. Biotechnol. Bioeng. 2009;104:127-33.
Ishizuka N, Minakuchi H, Nakanishi K, Soga N, Nagayama H, Hosoya K, Tanaka N. Performance of a monolithic silica column in a capillary under pressure- driven and electrodriven conditions. Anal. Chem. 2000;72:1275-80.
Ishizuka N, Kobayashi H, Minakuchi H, Nakanishi K, Hirao K, Hosoya K, Ikegami T, Tanaka N. Monolithic silica columns for high-efficiency separations by high-performance liquid chromatography. J. Chromatogr. A. 2002;960:85-96.
Zajickova Z. Advances in the development and applications of organic-silica hybrid monoliths. J. Sep. Sci. 2017;40:25-48.
Gama MR, Rocha FRP, Bottoli CBG. Monoliths: Synthetic routes, functionalization and innovative analytical applications. TrAC - Trends Anal. Chem. 2019;115:39-51.
Masini JC, do Nascimento FH, Vitek R. Porous monolithic materials for extraction and preconcentration of pollutants from environmental waters. Trends Environ. Anal. Chem. 2021;29, e00112.
Svec F. Porous polymer monoliths: amazingly wide variety of techniques enabling their preparation. J. Chromatogr. A. 2010;1217:902-24.
Catalá-Icardo M, Torres-Cartas S, Meseguer-Lloret S, Simó-Alfonso EF, Herrero-Martínez JM. Photografted fluoropolymers as novel chromatographic supports for polymeric monolithic stationary phases. Talanta 2018;187:216-22.
do Nascimento FH, Moraes AH, Trazzi CRL, Velasques CM, Masini JC. Fast construction of polymer monolithic columns inside fluorinated ethylene propylene (FEP) tubes for separation of proteins by reversed-phase liquid chromatography. Talanta 2020;217, 121063.
do Nascimento FH, Masini JC. Immobilized metal affinity sequential injection chromatography for the separation of proteins. Anal. Lett. 2020;53:522-35.
Terborg L, Masini JC, Lin M, Lipponen K, Riekolla ML, Svec F. Porous polymer monolithic columns with gold nanoparticles as an intermediate ligand for the separation of proteins in reverse phase-ion exchange mixed mode. J. Adv. Res. 2015;6:441-8.
Ribeiro LF, Masini JC. Complexing porous polymer monoliths for online solid-phase extraction of metals in sequential injection analysis with electrochemical detection. Talanta. 2018;185:387-95.
Ribeiro LF, Lopes Martins R, de Souza Costa DM, Masini JC. Poly glycidyl methacrylate-co-ethylene dimethacrylate porous monolith as a versatile platform for the development of separations and solid-phase extractions in sequential injection analyzers. J. Sep. Sci. 2018;41:4449-57.
Ribeiro LF, Masini JC, Svec F. Use of thiol functionalities for the preparation of porous monolithic structures and modulation of their surface chemistry: A review. TrAC - Trends Anal. Chem. 2019;118:606-24.
Boben J, Kramberger P, Petrovic N, Cankar K, Peterka M, Strancar A, Ravnikar M. Detection and quantification of Tomato mosaic virus in irrigation waters. Eur. J. Plant Pathol. 2007;118:59-71.
Ruščić J, Gutiérrez-Aguirre I, Urbas L, Kramberger P, Mehle N, Škorić D, Barut M, Ravnikar M, Krajačić M. A novel application of methacrylate based short monolithic columns: Concentrating Potato spindle tuber viroid from water samples. J. Chromatogr. A. 2013;1274:129-36.
Kramberger P, Peterka M, Boben J, Ravnikar M, Štrancar A. Short monolithic columns-A breakthrough in purification and fast quantification of tomato mosaic virus. J. Chromatogr. A. 2007;1144:143-9.
Alič Š, Naglič T, Tušek-Žnidarič M, Ravnikar M, Rački N, Peterka M, Dreo T. Newly isolated bacteriophages from the Podoviridae, Siphoviridae, and Myoviridae families have variable effects on putative novel Dickeya spp. Front. Microbiol. 2017;8:1-14.
Kovac K, Gutiérrez-Aguirre I, Banjac M, Peterka M, Poljsak-Prijatelji M, Ravnikar M, Zimsek Mijovski J, Schultz AC, Raspor P. A novel method for concentrating hepatitis A virus and caliciviruses from bottled water. J. Virol. Methods. 2009;162:272-5.
Steyer A, Gutiérrez-Aguirre I, Rački N, Beigot Glaser S, Brajer Humar B, Stražar M, Škrjanc I, Poljšak-Prijatelj M, Ravnikar M, Rupnik M. The detection rate of enteric viruses and clostridium difficile in a waste water treatment plant effluent. Food Environ. Virol. 2015;7:164-72.
Balasubramanian MN, Rački N, Gonçalves J, Kovač K, Žnidarič MT, Turk V, Ravnikar M, Gutiérrez-Aguirre I. Enhanced detection of pathogenic enteric viruses in coastal marine environment by concentration using methacrylate monolithic chromatographic supports paired with quantitative PCR. Water Res. 2016;106:405-14.
Gonçalves J, Gutiérrez-Aguirre I, Balasubramanian MN, Zagorščak M, Ravnikar M, Turk V. Surveillance of human enteric viruses in coastal waters using concentration with methacrylate monolithic supports prior to detection by RT-qPCR. Mar. Pollut. Bull. 2018;128:307-17.
Peskoller C, Niessner R, Seidel M. Development of an epoxy-based monolith used for the affinity capturing of Eschericha coli bacteria. J. Chromatogr. A. 2009;1216:3794-801.
Wunderlich A, Torggler C, Elsässer D, Lück C, Niessner R, Seidel M. Rapid quantification method for Legionella pneumophila in surface water. Anal. Bioanal. Chem. 2016;408:2203-13.
Göpfert L, Klüpfel J, Heinritz C, Elsner M, Seidel M. Macroporous epoxy-based monoliths for rapid quantification of Pseudomonas aeruginosa by adsorption elution method optimized for qPCR. Anal. Bioanal. Chem. 2020;412:8185-95.
Ott S, Niessner R, Seidel M. Preparation of epoxy-based macroporous monolithic columns for the fast and efficient immunofiltration of Staphylococcus aureus. J. Sep. Sci. 2011;34:2181-92.
Elsäßer D, Ho J, Niessner R, Tiehm A, Seidel M. Heterogeneous asymmetric recombinase polymerase amplification (haRPA) for rapid hygiene control of large-volume water samples. Anal. Biochem. 2018;546:58-64.
Hess S, Niessner R, Seidel M. Quantitative detection of human adenovirus from river water by monolithic adsorption filtration and quantitative PCR. J. Virol. Methods. 2021;292, 114128.
Pei L, Rieger M, Lengger S, Ott S, Zawadsky C, Hartmann NM, Selinka HC, Tiehm A, Niessner R, Seidel M. Combination of crossflow ultrafiltration, monolithic affinity filtration, and quantitative reverse transcriptase PCR for rapid concentration and quantification of model viruses in water. Environ. Sci. Technol. 2012;46:10073-80.
Kunze A, Pei L, Elsässer D, Niessner R, Seidel M. High performance concentration method for viruses in drinking water. J. Virol. Methods. 2015;222:132-7.
Michen B, Graule T. Isoelectric points of viruses. J. Appl. Microbiol. 2010;109:388-97.
Shearer AEH, Kniel KE. Enhanced removal of norovirus surrogates, murine norovirus and tulane virus, from aqueous systems by zero-valent iron. J. Food Prot. 2018;81:1432-8.
Every dollar invested in water, sanitation brings four-fold return in costs - UN. 2014 https://news.un.org/en/story/2014/11/484032-every-dollar-invested-water-sanitation-brings-four-fold-return-costs-un
Rački N, Kramberger P, Steyer A, Gašperšič J, Štrancar A, Ravnikar M, Gutierrez-Aguirre I. Methacrylate monolith chromatography as a tool for waterborne virus removal. J. Chromatogr. A. 2015;1381:118-24.
Ji M, Liu Z, Sun K, Li Z, Fan X, Li Q. Bacteriophages in water pollution control: Advantages and limitations. Front. Environ. Sci. Eng. 2021;15:84.
Kitajima M, Sassi HP, Torrey JR. Pepper mild mottle virus as a water quality indicator. npj Clean Water. 2018;1:19.
Bivins A, Crank K, Greaves J, North D, Wu Z, Bibby K. Cross-assembly phage and pepper mild mottle virus as viral water quality monitoring tools-Potential, research gaps, and way forward. Curr. Opin. Environ. Sci. Heal. 2020;16:54-61.
Plleva FM, Galaev IY, Mattiasson B. Macroporous gels prepared at subzero temperatures as novel materials for chromatography of particulate-containing fluids and cell culture applications. J. Sep. Sci. 2007;30:1657-71.
Gu H, Liu Y, Wang L, Zhang B, Yin D, Zhang Q. Monolithic macroporous hydrogels prepared from oil-in-water high internal phase emulsions for high-efficiency purification of Enterovirus 71. Chem. Eng. J. 2020;401, 126051.
Fernandes CSM, Goncçalves B, Sousa M, Martins DL, Barroso T, Pina AS, Peixoto C, Aguiar-Ricardo A, Roque ACA. Biobased monoliths for adenovirus purification. ACS Appl. Mater. Interfaces. 2015;7:6605-12.
Schultz AC, Perelle S, Di Pasquale S, Kovac K, De Medici D, Fach P, Sommer HM, Hoorfar J. Collaborative validation of a rapid method for efficient virus concentration in bottled water. Int. J. Food Microbiol. 2011;145:S158-66.

Auteurs

Renan Vitek (R)

Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil.
Instituto Federal de Educação Ciência e Tecnologia de Mato Grosso, Cuiabá, Brazil.

Fernando H do Nascimento (FH)

Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil.

Jorge C Masini (JC)

Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil.

Articles similaires

Semiconductors Photosynthesis Polymers Carbon Dioxide Bacteria
1.00
Oryza Agricultural Irrigation Potassium Sodium Soil
Animals Huntington Disease Mitochondria Neurons Mice
Nanoparticles Needles Polylactic Acid-Polyglycolic Acid Copolymer Polyethylene Glycols Curcumin

Classifications MeSH