Pervasive transcription of the mitochondrial genome in


Journal

RNA biology
ISSN: 1555-8584
Titre abrégé: RNA Biol
Pays: United States
ID NLM: 101235328

Informations de publication

Date de publication:
15 10 2021
Historique:
pubmed: 8 7 2021
medline: 26 2 2022
entrez: 7 7 2021
Statut: ppublish

Résumé

The mitochondrial genome of the pathogenic yeast

Identifiants

pubmed: 34229573
doi: 10.1080/15476286.2021.1943929
pmc: PMC8677008
doi:

Substances chimiques

DNA, Mitochondrial 0
Mitochondrial Proteins 0
Exosome Multienzyme Ribonuclease Complex EC 3.1.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

303-317

Références

Methods Enzymol. 2008;447:463-88
pubmed: 19161856
Biochim Biophys Acta. 2012 Sep-Oct;1819(9-10):1027-34
pubmed: 22178375
Genome Biol Evol. 2013;5(3):578-90
pubmed: 23431001
J Antimicrob Chemother. 2009 Oct;64(4):764-73
pubmed: 19656781
Methods Mol Biol. 2018;1841:3-10
pubmed: 30259475
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
PLoS Genet. 2013 Jun;9(6):e1003569
pubmed: 23818866
Nucleic Acids Res. 2013 Jan;41(2):1223-40
pubmed: 23221631
Nat Protoc. 2012 May 31;7(6):1235-46
pubmed: 22653162
Bioinformatics. 2014 Apr 1;30(7):923-30
pubmed: 24227677
RNA. 2018 Sep;24(9):1241-1254
pubmed: 29954949
Nature. 1981 Apr 9;290(5806):470-4
pubmed: 7219536
Curr Genet. 2005 Oct;48(4):265-9
pubmed: 16193327
Nucleic Acids Res. 2016 Jul 8;44(W1):W160-5
pubmed: 27079975
Nucleic Acids Res. 2011 May;39(10):4202-19
pubmed: 21266473
Nat Commun. 2018 Jan 15;9(1):189
pubmed: 29335486
Genome Res. 2015 Nov;25(11):1622-33
pubmed: 26294688
Trends Genet. 2016 Aug;32(8):508-522
pubmed: 27371117
Mol Cell Oncol. 2018 Sep 20;5(6):e1516452
pubmed: 30525095
Biochim Biophys Acta. 2013 Aug;1829(8):842-53
pubmed: 23454114
Science. 2007 Jun 8;316(5830):1484-8
pubmed: 17510325
Biochimie. 2015 Oct;117:48-62
pubmed: 26143009
Nat Rev Genet. 2007 Jun;8(6):413-23
pubmed: 17486121
J Mol Biol. 2008 Apr 4;377(4):1024-37
pubmed: 18304578
FEBS Lett. 1999 Sep 24;458(3):337-42
pubmed: 10570936
Nat Rev Microbiol. 2014 Sep;12(9):647-53
pubmed: 25069631
Nucleic Acids Res. 1993 Aug 25;21(17):4039-45
pubmed: 8371978
Mol Biol Cell. 2006 Mar;17(3):1184-93
pubmed: 16371505
BMC Bioinformatics. 2016 Apr 19;17:172
pubmed: 27094401
J Mol Biol. 2007 Sep 7;372(1):23-36
pubmed: 17658549
Clin Microbiol Rev. 2007 Jan;20(1):133-63
pubmed: 17223626
Trends Genet. 2000 Jun;16(6):276-7
pubmed: 10827456
Sci Adv. 2015;1(3):e1500248
pubmed: 25977940
Int Rev Cytol. 2000;194:197-238
pubmed: 10494627
Mol Gen Genet. 1998 Oct;260(1):108-14
pubmed: 9829834
Nature. 2012 Sep 6;489(7414):101-8
pubmed: 22955620
Eukaryot Cell. 2011 May;10(5):672-82
pubmed: 21398508
Annu Rev Genet. 1999;33:351-97
pubmed: 10690412
J Biol Chem. 2003 Jan 17;278(3):1603-11
pubmed: 12426313
J Proteome Res. 2019 Jan 4;18(1):217-224
pubmed: 30336047
Nucleic Acids Res. 2002 Dec 1;30(23):5074-86
pubmed: 12466530
Nat Commun. 2018 Jul 2;9(1):2558
pubmed: 29967381
Adv Exp Med Biol. 2011;702:63-78
pubmed: 21713678
Biochem J. 2003 Mar 15;370(Pt 3):751-62
pubmed: 12467494
Nat Biotechnol. 2008 Dec;26(12):1367-72
pubmed: 19029910
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
BMC Genomics. 2017 Aug 10;18(1):602
pubmed: 28797240
Biochim Biophys Acta. 2010 Jun-Jul;1797(6-7):1105-12
pubmed: 20056103
Cell. 1987 Oct 9;51(1):89-99
pubmed: 3308116
Nature. 2004 Jul 1;430(6995):35-44
pubmed: 15229592
Microbiology (Reading). 2003 Dec;149(Pt 12):3629-3637
pubmed: 14663094
Mol Cell Biol. 2006 Apr;26(7):2869-76
pubmed: 16537927
Nucleic Acids Res. 2017 Jan 4;45(D1):D592-D596
pubmed: 27738138
Nucleic Acids Res. 2010 Jan;38(1):279-98
pubmed: 19864255
Annu Rev Genet. 2007;41:193-211
pubmed: 17614788
Enzymes. 2012;31:1-30
pubmed: 27166438
Plant Cell. 2012 Jan;24(1):123-36
pubmed: 22267485
BMC Genomics. 2015 Oct 21;16:827
pubmed: 26487099
Methods Enzymol. 2010;470:737-58
pubmed: 20946834
Proc Natl Acad Sci U S A. 2006 Jul 5;103(27):10352-10357
pubmed: 16801547
Yeast. 2003 Dec;20(16):1339-47
pubmed: 14663826
Nucleic Acids Res. 2019 May 7;47(8):e47
pubmed: 30783653
J Mol Biol. 1998 Sep 25;282(3):525-41
pubmed: 9737920
Mol Cell. 2008 Mar 28;29(6):717-28
pubmed: 18374646
Mol Cell. 2012 Nov 9;48(3):409-21
pubmed: 23000176
Curr Genet. 1995 Aug;28(3):217-24
pubmed: 8529267
Nat Biotechnol. 2012 May;30(5):434-9
pubmed: 22522955
Eur J Biochem. 1968 Jul;5(2):276-84
pubmed: 4233214
PLoS One. 2013 Oct 15;8(10):e78105
pubmed: 24143261
G3 (Bethesda). 2011 Dec;1(7):559-70
pubmed: 22384367
Nat Commun. 2018 Jan 8;9(1):97
pubmed: 29311576
Curr Opin Microbiol. 2013 Oct;16(5):652-8
pubmed: 23932204
Trends Genet. 2003 Dec;19(12):709-16
pubmed: 14642752
Biochim Biophys Acta. 2002 Oct 3;1556(1):73-80
pubmed: 12351220
Curr Genet. 1995 Jul;28(2):108-12
pubmed: 8590460
Nat Protoc. 2016 Dec;11(12):2301-2319
pubmed: 27809316
Curr Opin Microbiol. 2015 Apr;24:15-20
pubmed: 25596348
Nat Protoc. 2008;3(9):1414-21
pubmed: 18772868
Nat Rev Genet. 2002 Dec;3(12):918-30
pubmed: 12459722
Nature. 2009 Jun 4;459(7247):657-62
pubmed: 19465905
Genome Biol Evol. 2013;5(2):418-38
pubmed: 23335123
Biochim Biophys Acta. 2013 Jun-Jul;1829(6-7):552-60
pubmed: 23352926
Mol Cell Proteomics. 2007 Jul;6(7):1215-25
pubmed: 17426019
Cell. 2011 Aug 19;146(4):645-58
pubmed: 21854988
Am J Physiol Cell Physiol. 2006 Dec;291(6):C1129-47
pubmed: 16760263
Biochim Biophys Acta. 2010 Jun-Jul;1797(6-7):1086-98
pubmed: 20056105
Nature. 2018 Aug;560(7717):238-242
pubmed: 30046113
Nat Methods. 2009 May;6(5):359-62
pubmed: 19377485
Eukaryot Cell. 2005 Aug;4(8):1493-502
pubmed: 16087754
Nat Rev Genet. 2010 Jul;11(7):512-24
pubmed: 20559329
Nucleic Acids Res. 2008 Jan;36(1):319-29
pubmed: 18032430
Proc Natl Acad Sci U S A. 2012 Dec 4;109(49):E3358-66
pubmed: 23151513
Trends Plant Sci. 2012 Dec;17(12):737-44
pubmed: 22981395
Fungal Genet Biol. 2011 Sep;48(9):858-65
pubmed: 21511047
Biochimie. 2015 Oct;117:28-36
pubmed: 25956976
Bioessays. 2019 Nov;41(11):e1900043
pubmed: 31577043
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
FEBS Lett. 2009 Jul 21;583(14):2333-8
pubmed: 19540236
Nat Microbiol. 2019 Nov;4(11):1907-1918
pubmed: 31308523
Cell. 2009 Feb 20;136(4):763-76
pubmed: 19239894
J Bacteriol. 1999 Mar;181(6):1868-74
pubmed: 10074081
Appl Environ Microbiol. 2012 Aug;78(15):5440-3
pubmed: 22610439
Proc Natl Acad Sci U S A. 1992 Aug 1;89(15):6813-7
pubmed: 1379722
Gene. 2004 Oct 27;341:119-27
pubmed: 15474295
J Biol Chem. 2008 Feb 15;283(7):3767-72
pubmed: 18086665
Nat Genet. 2010 Jul;42(7):590-8
pubmed: 20543849
Microbiol Spectr. 2018 Jul;6(4):
pubmed: 30003872

Auteurs

Karolina Łabędzka-Dmoch (K)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Adam Kolondra (A)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Magdalena A Karpińska (MA)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Sonia Dębek (S)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Joanna Grochowska (J)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.

Maciej Grochowski (M)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Jakub Piątkowski (J)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Thi Hoang Diu Bui (T)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.

Paweł Golik (P)

Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.

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