"Smart Decomposition" of Cyclic Alanine-Alanine Dipeptide by VUV Radiation: A Seed for the Synthesis of Biologically Relevant Species.


Journal

The journal of physical chemistry letters
ISSN: 1948-7185
Titre abrégé: J Phys Chem Lett
Pays: United States
ID NLM: 101526034

Informations de publication

Date de publication:
05 Aug 2021
Historique:
pubmed: 30 7 2021
medline: 31 8 2021
entrez: 29 7 2021
Statut: ppublish

Résumé

A combined experimental and theoretical study shows how the interaction of VUV radiation with cyclo-(alanine-alanine), one of the 2,5-diketopiperazines (DKPs), produces reactive oxazolidinone intermediates. The theoretical simulations reveal that the interaction of these intermediates with other neutral and charged fragments, released in the molecular decomposition, leads either to the reconstruction of the cyclic dipeptide or to the formation of longer linear peptide chains. These results may explain how DKPs could have, on one hand, survived hostile chemical environments and, on the other, provided the seed for amino acid polymerization. Shedding light on the mechanisms of production of such prebiotic building blocks is of paramount importance to understanding the abiotic synthesis of relevant biologically active compounds.

Identifiants

pubmed: 34324354
doi: 10.1021/acs.jpclett.1c01788
doi:

Substances chimiques

Diketopiperazines 0
Oxazolidinones 0
Peptides 0
Peptides, Cyclic 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

7379-7386

Auteurs

Darío Barreiro-Lage (D)

Departamento de Química, Módulo 13, Universidad Autónoma de Madrid, 28049 Madrid, Spain.

Paola Bolognesi (P)

Institute of Structure of Matter-CNR (ISM-CNR), Area della Ricerca di Roma 1, Via Salaria km 29.300, 00015 Monterotondo, Italy.

Jacopo Chiarinelli (J)

Institute of Structure of Matter-CNR (ISM-CNR), Area della Ricerca di Roma 1, Via Salaria km 29.300, 00015 Monterotondo, Italy.

Robert Richter (R)

Elettra Sincrotrone Trieste, 34149 Basovizza, Trieste, Italy.

Henning Zettergren (H)

Department of Physics, Stockholm University, Se-10691 Stockholm, Sweden.

Mark H Stockett (MH)

Department of Physics, Stockholm University, Se-10691 Stockholm, Sweden.

Laura Carlini (L)

Institute of Structure of Matter-CNR (ISM-CNR), Area della Ricerca di Roma 1, Via Salaria km 29.300, 00015 Monterotondo, Italy.

Sergio Diaz-Tendero (S)

Departamento de Química, Módulo 13, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
Condensed Matter Physics Center (IFIMAC), Universidad Autónoma de Madrid, 28049 Madrid, Spain.
Institute for Advanced Research in Chemical Science (IAdChem), Universidad Autónoma de Madrid, 28049 Madrid, Spain.

Lorenzo Avaldi (L)

Institute of Structure of Matter-CNR (ISM-CNR), Area della Ricerca di Roma 1, Via Salaria km 29.300, 00015 Monterotondo, Italy.

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Classifications MeSH