Interaction with the CCT chaperonin complex limits APOBEC3A cytidine deaminase cytotoxicity.

APOBEC3A CCT chaperonin cytidine deaminase mutational signatures protein interaction

Journal

EMBO reports
ISSN: 1469-3178
Titre abrégé: EMBO Rep
Pays: England
ID NLM: 100963049

Informations de publication

Date de publication:
06 09 2021
Historique:
revised: 02 07 2021
received: 22 11 2020
accepted: 05 07 2021
pubmed: 5 8 2021
medline: 8 9 2022
entrez: 4 8 2021
Statut: ppublish

Résumé

The APOBEC3 cytidine deaminases are implicated as the cause of a prevalent somatic mutation pattern found in cancer genomes. The APOBEC3 enzymes act as viral restriction factors by mutating viral genomes. Mutation of the cellular genome is presumed to be an off-target activity of the enzymes, although the regulatory measures for APOBEC3 expression and activity remain undefined. It is therefore difficult to predict circumstances that enable APOBEC3 interaction with cellular DNA that leads to mutagenesis. The APOBEC3A (A3A) enzyme is the most potent deaminase of the family. Using proteomics, we evaluate protein interactors of A3A to identify potential regulators. We find that A3A interacts with the chaperonin-containing TCP-1 (CCT) complex, a cellular machine that assists in protein folding and function. Importantly, depletion of CCT results in A3A-induced DNA damage and cytotoxicity. Evaluation of cancer genomes demonstrates an enrichment of A3A mutational signatures in cancers with silencing mutations in CCT subunit genes. Together, these data suggest that the CCT complex interacts with A3A, and that disruption of CCT function results in increased A3A mutational activity.

Identifiants

pubmed: 34347354
doi: 10.15252/embr.202052145
pmc: PMC8419680
doi:

Substances chimiques

Proteins 0
APOBEC3A protein, human EC 3.5.4.5
Cytidine Deaminase EC 3.5.4.5
Chaperonin Containing TCP-1 EC 3.6.1.-

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e52145

Subventions

Organisme : NCI NIH HHS
ID : R01 CA181359
Pays : United States
Organisme : NCI NIH HHS
ID : R21 CA185799
Pays : United States
Organisme : NCI NIH HHS
ID : P01 CA196539
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI118891
Pays : United States
Organisme : NCI NIH HHS
ID : K08 CA212299
Pays : United States

Informations de copyright

© 2021 The Authors.

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Auteurs

Abby M Green (AM)

Department of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA.
Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.

Rachel A DeWeerd (RA)

Department of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA.

David R O'Leary (DR)

Department of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA.

Ava R Hansen (AR)

Department of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA.

Katharina E Hayer (KE)

Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia and University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.
Department of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.

Katarzyna Kulej (K)

Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia and University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.

Ariel S Dineen (AS)

Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia and University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.

Julia H Szeto (JH)

Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia and University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.

Benjamin A Garcia (BA)

Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Perelman School of Medicine, Epigenetics Institute, University of Pennsylvania, Philadelphia, PA, USA.

Matthew D Weitzman (MD)

Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia and University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.
Perelman School of Medicine, Epigenetics Institute, University of Pennsylvania, Philadelphia, PA, USA.
Center for Childhood Cancer Research, Children's Hospital of Philadelphia, Philadelphia, PA, USA.

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Classifications MeSH