Structural and biochemical characterization of the Clostridium perfringens-specific Zn


Journal

Biochemical and biophysical research communications
ISSN: 1090-2104
Titre abrégé: Biochem Biophys Res Commun
Pays: United States
ID NLM: 0372516

Informations de publication

Date de publication:
22 10 2021
Historique:
received: 06 08 2021
accepted: 27 08 2021
pubmed: 6 9 2021
medline: 22 12 2021
entrez: 5 9 2021
Statut: ppublish

Résumé

Phage-derived endolysins, enzymes that degrade peptidoglycans, have the potential to serve as alternative antimicrobial agents. Psa, which was identified as an endolysin encoded in the genome of Clostridium perfringens st13, was shown to specifically lyse C. perfringens. Psa has an N-terminal catalytic domain that is homologous to the Amidase_2 domain (PF01510), and a novel C-terminal cell wall-binding domain. Here, we determined the X-ray structure of the Psa catalytic domain (Psa-CD) at 1.65 Å resolution. Psa-CD has a typical Amidase_2 domain structure, consisting of a spherical structure with a central β-sheet surrounded by two α-helix groups. Furthermore, there is a Zn

Identifiants

pubmed: 34482025
pii: S0006-291X(21)01267-5
doi: 10.1016/j.bbrc.2021.08.085
pii:
doi:

Substances chimiques

Peptidoglycan 0
Endopeptidases EC 3.4.-
endolysin EC 3.4.99.-
Amidohydrolases EC 3.5.-
amidase EC 3.5.1.4
Zinc J41CSQ7QDS

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

66-72

Informations de copyright

Copyright © 2021 Elsevier Inc. All rights reserved.

Auteurs

Hiroshi Sekiya (H)

Department of Infectious Disease, College of Pharmaceutical Sciences, Matsuyama University, 4-2 Bunkyo-cho, Matsuyama, Ehime, 790-8578, Japan.

Shigehiro Kamitori (S)

Life Science Research Center and Faculty of Medicine, Kagawa University, 1750-1, Ikenobe, Miki-cho, Kita-gun, Kagawa, 761-0793, Japan.

Hirofumi Nariya (H)

Laboratory of Food Microbiology, Graduate School of Human Life Sciences Food and Nutritional Sciences, Jumonji University, 2-1-28, Kansawa, Niiza, Saitama, 352-8510, Japan.

Risa Matsunami (R)

Department of Infectious Disease, College of Pharmaceutical Sciences, Matsuyama University, 4-2 Bunkyo-cho, Matsuyama, Ehime, 790-8578, Japan.

Eiji Tamai (E)

Department of Infectious Disease, College of Pharmaceutical Sciences, Matsuyama University, 4-2 Bunkyo-cho, Matsuyama, Ehime, 790-8578, Japan; Life Science Research Center and Faculty of Medicine, Kagawa University, 1750-1, Ikenobe, Miki-cho, Kita-gun, Kagawa, 761-0793, Japan. Electronic address: etamai@g.matsuyama-u.ac.jp.

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Classifications MeSH