Whole-genome sequencing as a first-tier diagnostic framework for rare genetic diseases.

Rare genetic disease national health systems next generation sequencing precision medicine whole genome sequencing whole-exome sequencing

Journal

Experimental biology and medicine (Maywood, N.J.)
ISSN: 1535-3699
Titre abrégé: Exp Biol Med (Maywood)
Pays: England
ID NLM: 100973463

Informations de publication

Date de publication:
12 2021
Historique:
pubmed: 16 9 2021
medline: 17 12 2021
entrez: 15 9 2021
Statut: ppublish

Résumé

Rare diseases affect nearly 300 million people globally with most patients aged five or less. Traditional diagnostic approaches have provided much of the diagnosis; however, there are limitations. For instance, simply inadequate and untimely diagnosis adversely affects both the patient and their families. This review advocates the use of whole genome sequencing in clinical settings for diagnosis of rare genetic diseases by showcasing five case studies. These examples specifically describe the utilization of whole genome sequencing, which helped in providing relief to patients via correct diagnosis followed by use of precision medicine.

Identifiants

pubmed: 34521224
doi: 10.1177/15353702211040046
pmc: PMC8669166
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

2610-2617

Références

J Med Genet. 2019 Dec;56(12):783-791
pubmed: 31023718
J Inherit Metab Dis. 2004;27(1):47-55
pubmed: 14970745
EURASIP J Bioinform Syst Biol. 2012 Nov 27;2012(1):18
pubmed: 23186305
Ann Neurol. 2000 Apr;47(4):517-20
pubmed: 10762165
Am J Hum Genet. 1996 Jan;58(1):118-25
pubmed: 8554047
N Engl J Med. 2009 Oct 22;361(17):1676-87
pubmed: 19846853
Genome Med. 2020 May 27;12(1):48
pubmed: 32460895
Nature. 1959 Jan 31;183(4657):302-3
pubmed: 13632697
Genome Biol. 2015 Jun 26;16:134
pubmed: 26112015
Arch Bronconeumol. 2010 Mar;46(3):129-34
pubmed: 20096498
Sci Transl Med. 2014 Dec 3;6(265):265ra168
pubmed: 25473036
Am J Med Genet C Semin Med Genet. 2018 Dec;178(4):458-463
pubmed: 30580481
Brief Funct Genomics. 2016 Jan;15(1):1-9
pubmed: 25392234
Nature. 2009 Sep 10;461(7261):272-6
pubmed: 19684571
PLoS One. 2007 Mar 28;2(3):e327
pubmed: 17389918
Genet Med. 2018 Jan;20(1):159-163
pubmed: 28640241
Proc Natl Acad Sci U S A. 1981 Nov;78(11):6633-7
pubmed: 6273878
Clin Transl Sci. 2018 Jan;11(1):11-20
pubmed: 28796411
Orphanet J Rare Dis. 2010 Jun 03;5:16
pubmed: 20525256
Genome Med. 2021 Mar 17;13(1):40
pubmed: 33726816
Genes (Basel). 2017 Oct 03;8(10):
pubmed: 28972564
Sci Transl Med. 2011 Jun 15;3(87):87re3
pubmed: 21677200
Clin Chem. 2016 Apr;62(4):647-54
pubmed: 26847218
Lancet. 2017 Dec 17;388(10063):3017-3026
pubmed: 27939059
Cell. 2019 Mar 21;177(1):32-37
pubmed: 30901545
Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21301-6
pubmed: 23236188
Hum Genet. 2016 Mar;135(3):359-62
pubmed: 26742503
Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2377-82
pubmed: 19171898
Blood. 2008 Aug 15;112(4):965-74
pubmed: 18505780
N Engl J Med. 2019 Oct 24;381(17):1644-1652
pubmed: 31597037
Nat Genet. 2008 Mar;40(3):275-9
pubmed: 18305478
Genome Res. 2011 Jun;21(6):813-20
pubmed: 21632748
N Engl J Med. 2017 Nov 2;377(18):1723-1732
pubmed: 29091570
Arch Neurol. 1991 Sep;48(9):908-11
pubmed: 1953413
BMC Bioinformatics. 2014 Jul 19;15:247
pubmed: 25038816
Neurology. 2001 Aug 28;57(4):576-81
pubmed: 11548735
Genet Med. 2020 Jan;22(1):85-94
pubmed: 31358947
Sci Rep. 2017 Nov 1;7(1):14789
pubmed: 29093467
Pediatrics. 2017 Oct;140(4):
pubmed: 28939701
Nat Commun. 2018 Apr 12;9(1):1416
pubmed: 29650961
Lancet. 2015 Apr 4;385(9975):1305-14
pubmed: 25529582
C R Hebd Seances Acad Sci. 1959 Mar 16;248(11):1721-2
pubmed: 13639368
Genomics Proteomics Bioinformatics. 2012 Apr;10(2):58-73
pubmed: 22768980
Nucleic Acids Res. 1991 Jun 25;19(12):3237-41
pubmed: 2062640
JIMD Rep. 2012;3:5-9
pubmed: 23430867
Cell. 2015 Sep 24;163(1):33-8
pubmed: 26406369
Cold Spring Harb Mol Case Stud. 2017 Sep 1;3(5):
pubmed: 28550066
BMC Med Genomics. 2016 Feb 04;9:7
pubmed: 26846091
Nature. 2020 Jul;583(7814):96-102
pubmed: 32581362
Eur J Hum Genet. 2020 Feb;28(2):165-173
pubmed: 31527858
Nat Genet. 2010 Sep;42(9):790-3
pubmed: 20711175
Cytogenet Genome Res. 2006;115(3-4):303-9
pubmed: 17124414
Nat Genet. 2010 Jan;42(1):30-5
pubmed: 19915526
Clin Transl Sci. 2018 Jan;11(1):21-27
pubmed: 28796445
Isr Med Assoc J. 2016 Jun;18(6):359-63
pubmed: 27468531
Proc Natl Acad Sci U S A. 2015 Apr 28;112(17):5473-8
pubmed: 25827230
Genet Med. 2015 May;17(5):337-47
pubmed: 25255367
Eur J Hum Genet. 2018 Nov;26(11):1635-1647
pubmed: 29967337
JAMA. 2015 Sep 1;314(9):895-903
pubmed: 26325558
BMJ. 2018 Mar 14;360:j5492
pubmed: 29540357
J Hum Genet. 2019 May;64(5):359-368
pubmed: 30760880
Genet Med. 2018 Apr;20(4):435-443
pubmed: 28771251
Nat Rev Genet. 2013 Oct;14(10):681-91
pubmed: 23999272
Bioinformatics. 2014 Jun 15;30(12):1707-13
pubmed: 24558117
Biomed Res Int. 2016;2016:6329217
pubmed: 27247941

Auteurs

Haseeb Nisar (H)

Office of Research, Innovation and Commercialization, University of Management and Technology, Lahore 54000, Pakistan.
School of Biochemistry & Biotechnology, University of the Punjab, Lahore 54000, Pakistan.

Bilal Wajid (B)

Department of Electrical Engineering, University of Engineering and Technology, Lahore 54000, Pakistan.
Ibn Sina Research & Development Division, Sabz-Qalam, Lahore 54000, Pakistan.
Department of Computer Sciences, University of Management and Technology, Lahore 54000, Pakistan.

Samiah Shahid (S)

Institute of Molecular Biology and Biotechnology, The University of Lahore, Lahore 54000, Pakistan.

Faria Anwar (F)

Out Patient Department, Mayo Hospital, Lahore 54000, Pakistan.

Imran Wajid (I)

Ibn Sina Research & Development Division, Sabz-Qalam, Lahore 54000, Pakistan.

Asia Khatoon (A)

School of Biochemistry & Biotechnology, University of the Punjab, Lahore 54000, Pakistan.

Mian Usman Sattar (MU)

Institute of Social Sciences, Istanbul Commerce University, Istanbul, Turkey.

Saima Sadaf (S)

School of Biochemistry & Biotechnology, University of the Punjab, Lahore 54000, Pakistan.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH