Ranking sets of morbidities using hypergraph centrality.


Journal

Journal of biomedical informatics
ISSN: 1532-0480
Titre abrégé: J Biomed Inform
Pays: United States
ID NLM: 100970413

Informations de publication

Date de publication:
10 2021
Historique:
received: 13 05 2021
revised: 30 07 2021
accepted: 09 09 2021
pubmed: 18 9 2021
medline: 21 10 2021
entrez: 17 9 2021
Statut: ppublish

Résumé

Multi-morbidity, the health state of having two or more concurrent chronic conditions, is becoming more common as populations age, but is poorly understood. Identifying and understanding commonly occurring sets of diseases is important to inform clinical decisions to improve patient services and outcomes. Network analysis has been previously used to investigate multi-morbidity, but a classic application only allows for information on binary sets of diseases to contribute to the graph. We propose the use of hypergraphs, which allows for the incorporation of data on people with any number of conditions, and also allows us to obtain a quantitative understanding of the centrality, a measure of how well connected items in the network are to each other, of both single diseases and sets of conditions. Using this framework we illustrate its application with the set of conditions described in the Charlson morbidity index using data extracted from routinely collected population-scale, patient level electronic health records (EHR) for a cohort of adults in Wales, UK. Stroke and diabetes were found to be the most central single conditions. Sets of diseases featuring diabetes; diabetes with Chronic Pulmonary Disease, Renal Disease, Congestive Heart Failure and Cancer were the most central pairs of diseases. We investigated the differences between results obtained from the hypergraph and a classic binary graph and found that the centrality of diseases such as paraplegia, which are connected strongly to a single other disease is exaggerated in binary graphs compared to hypergraphs. The measure of centrality is derived from the weighting metrics calculated for disease sets and further investigation is needed to better understand the effect of the metric used in identifying the clinical significance and ranked centrality of grouped diseases. These initial results indicate that hypergraphs can be used as a valuable tool for analysing previously poorly understood relationships and information available in EHR data.

Identifiants

pubmed: 34534697
pii: S1532-0464(21)00245-8
doi: 10.1016/j.jbi.2021.103916
pmc: PMC8524321
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

103916

Subventions

Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : British Heart Foundation
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/R016615
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/S027750/1
Pays : United Kingdom

Informations de copyright

Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.

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Auteurs

James Rafferty (J)

Health Data Research-UK, Swansea University, Singleton Park, Swansea SA1 8PP, UK. Electronic address: j.m.rafferty@swansea.ac.uk.

Alan Watkins (A)

Health Data Research-UK, Swansea University, Singleton Park, Swansea SA1 8PP, UK.

Jane Lyons (J)

Health Data Research-UK, Swansea University, Singleton Park, Swansea SA1 8PP, UK.

Ronan A Lyons (RA)

Health Data Research-UK, Swansea University, Singleton Park, Swansea SA1 8PP, UK.

Ashley Akbari (A)

Health Data Research-UK, Swansea University, Singleton Park, Swansea SA1 8PP, UK.

Niels Peek (N)

Division of Informatics, Imaging and Data Science, School of Health Sciences, The University of Manchester, Manchester, UK; Alan Turing Institute, London, UK.

Farideh Jalali-Najafabadi (F)

Centre for Genetics and Genomics Versus Arthritis, Centre for Musculoskeletal Research, Faculty of Biology, Medicine and Health, Manchester Academic Health Science Centre, The University of Manchester, Manchester, UK.

Thamer Ba Dhafari (T)

Division of Informatics, Imaging and Data Science, School of Health Sciences, The University of Manchester, Manchester, UK.

Alexander Pate (A)

Division of Informatics, Imaging and Data Science, School of Health Sciences, The University of Manchester, Manchester, UK.

Glen P Martin (GP)

Division of Informatics, Imaging and Data Science, School of Health Sciences, The University of Manchester, Manchester, UK.

Rowena Bailey (R)

Health Data Research-UK, Swansea University, Singleton Park, Swansea SA1 8PP, UK.

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