Familial cleft tongue caused by a unique translation initiation codon variant in TP63.


Journal

European journal of human genetics : EJHG
ISSN: 1476-5438
Titre abrégé: Eur J Hum Genet
Pays: England
ID NLM: 9302235

Informations de publication

Date de publication:
02 2022
Historique:
received: 05 05 2021
accepted: 13 09 2021
revised: 06 08 2021
pubmed: 12 10 2021
medline: 5 4 2022
entrez: 11 10 2021
Statut: ppublish

Résumé

Variants in transcription factor p63 have been linked to several autosomal dominantly inherited malformation syndromes. These disorders show overlapping phenotypic characteristics with various combinations of the following features: ectodermal dysplasia, split-hand/foot malformation/syndactyly, lacrimal duct obstruction, hypoplastic breasts and/or nipples, ankyloblepharon filiforme adnatum, hypospadias and cleft lip/palate. We describe a family with six individuals presenting with a striking novel phenotype characterized by a furrowed or cleft tongue, a narrow face, reddish hair, freckles and various foot deformities. Whole-exome sequencing (WES) identified a novel heterozygous variant, c.3G>T, in TP63 affecting the translation initiation codon (p.1Met?). Sanger sequencing confirmed dominant inheritance of this unique variant in all six affected family members. In summary, our findings indicate that heterozygous variants in TP63 affecting the first translation initiation codon result in a novel phenotype dominated by a cleft tongue, expanding the complex genotypic and phenotypic spectrum of TP63-associated disorders.

Identifiants

pubmed: 34629465
doi: 10.1038/s41431-021-00967-x
pii: 10.1038/s41431-021-00967-x
pmc: PMC8821562
doi:

Substances chimiques

Codon, Initiator 0
TP63 protein, human 0
Transcription Factors 0
Tumor Suppressor Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

211-218

Informations de copyright

© 2021. The Author(s).

Références

Sutton VR, van Bokhoven H. TP63-related disorders. GeneReviews®:Seattle (WA);1993.
Rinne T, Hamel B, van BH, Brunner HG. Pattern of p63 mutations and their phenotypes-update. Am J Med Genet Part A. 2006; 140. https://pubmed.ncbi.nlm.nih.gov/16691622/ .
Vanbokhoven H, Melino G, Candi E, Declercq W. p63, a story of mice and men. J Investig Dermatol. 2011; 131:1196–207. http://www.sciencedirect.com/science/article/pii/S0022202X15352878 .
Rinne T, Clements SE, Lamme E, Duijf PHG, Bolat E, Meijer R, et al. A novel translation re-initiation mechanism for the p63 gene revealed by amino-terminal truncating mutations in Rapp-Hodgkin/Hay-Wells-like syndromes. Hum Mol Genet. 2008;17:1968–77. https://doi.org/10.1093/hmg/ddn094 .
doi: 10.1093/hmg/ddn094 pubmed: 18364388
Khandelwal KD, van den Boogaard M-JH, Mehrem SL, Gebel J, Fagerberg C, van Beusekom E, et al. Deletions and loss-of-function variants in TP63 associated with orofacial clefting. Eur J Hum Genet. 2019;27:1101–12.
doi: 10.1038/s41431-019-0370-0
Fisher ML, Balinth S, Mills AA. p63-related signaling at a glance. J Cell Sci. 2020; 133. https://pubmed.ncbi.nlm.nih.gov/32917730/ .
Galoczova M, Coates P, Vojtesek B. STAT3, stem cells, cancer stem cells and p63. Cell Mol Biol Lett. 2018;23:12. https://doi.org/10.1186/s11658-018-0078-0 .
Yang A, Kaghad M, Wang Y, Gillett E, Fleming MD, Dötsch V, et al. p63, a p53 homolog at 3q27–29, encodes multiple products with transactivating, death-inducing, and dominant-negative activities. Mol Cell. 1998;2:305–16. https://doi.org/10.1016/S1097-2765(00)80275-0 .
doi: 10.1016/S1097-2765(00)80275-0 pubmed: 9774969
Sethi I, Sinha S, Buck MJ. Role of chromatin and transcriptional co-regulators in mediating p63-genome interactions in keratinocytes. BMC Genom. 2014;15:1042 https://doi.org/10.1186/1471-2164-15-1042 .
doi: 10.1186/1471-2164-15-1042
Serber Z, Lai HC, Yang A, Ou HD, Sigal MS, Kelly AE, et al. A C-terminal inhibitory domain controls the activity of p63 by an intramolecular mechanism. Mol Cell Biol. 2002;22:8601–11.
doi: 10.1128/MCB.22.24.8601-8611.2002
Bork P, Koonin EV. Predicting functions from protein sequences—where are the bottlenecks? Nat Genet. 1998;18:313–8. https://doi.org/10.1038/NG0498-313 .
doi: 10.1038/NG0498-313 pubmed: 9537411
van Bokhoven H, Brunner HG. Splitting p63. Am J Hum Genet. 2002;71:1–13.
doi: 10.1086/341450
Serber Z, Lai HC, Yang A, Ou HD, Sigal MS, Kelly AE, et al. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. J Proteom. 2014;96:253–62. https://doi.org/10.1016/j.jprot.2013.11.014 .
doi: 10.1016/j.jprot.2013.11.014
Soares E, Zhou H. Master regulatory role of p63 in epidermal development and disease. Cell Mol Life Sci. 2018;75:1179–90.
doi: 10.1007/s00018-017-2701-z
Gatti V, Fierro C, Compagnone M, Giangrazi F, Markert EK, Bongiorno-Borbone L, et al. ΔNp63 regulates the expression of hyaluronic acid-related genes in breast cancer cells. Oncogenesis. 2018;7:65.
doi: 10.1038/s41389-018-0073-3
Mangiulli M, Valletti A, Caratozzolo MF, Tullo A, Sbisà E, Pesole G, et al. Identification and functional characterization of two new transcriptional variants of the human p63 gene. Nucleic Acids Res. 2009;37:6092–104. https://doi.org/10.1093/nar/gkp674 .
doi: 10.1093/nar/gkp674 pubmed: 19700772 pmcid: 2764424
Serra V, Castori M, Paradisi M, Bui L, Melino G, Terrinoni A. Functional characterization of a novel TP63 mutation in a family with overlapping features of Rapp-Hodgkin/AEC/ADULT syndromes. Am J Med Genet Part A. 2011;155:3104–9.
doi: 10.1002/ajmg.a.34335
van Bokhoven H, Hamel BCJ, Bamshad M, Sangiorgi E, Gurrieri F, Duijf PHG, et al. p63 gene mutations in EEC syndrome, limb-mammary syndrome, and isolated split hand–split foot malformation suggest a genotype-phenotype correlation. Am J Hum Genet. 2001;69:481–92. https://doi.org/10.1086/323123 .
doi: 10.1086/323123 pubmed: 11462173 pmcid: 1235479
McGrath JA. Hay-Wells syndrome is caused by heterozygous missense mutations in the SAM domain of p63. Hum Mol Genet. 2001;10:221–9. https://doi.org/10.1093/hmg/10.3.221 .
doi: 10.1093/hmg/10.3.221 pubmed: 11159940
Karczewski, KJ, Francioli, LC, Tiao, G, et al. The mutational constraint spectrum quantified from variation in 141,456 humans. Nature 2020;581:434–443 (2020). https://doi.org/10.1038/s41586-020-2308-7 .
Tucker EJ, Jaillard S, Grover SR, van den Bergen J, Robevska G, Bell KM, et al. TP63-truncating variants cause isolated premature ovarian insufficiency. Hum Mutat. 2019;40:886–92.
pubmed: 30924587
Wenger T, Li D, Harr MH, Tan W-H, Pellegrino R, Stark Z, et al. Expanding the phenotypic spectrum of TP63-related disorders including the first set of monozygotic twins. Am J Med Genet. 2018;176:75–81.
doi: 10.1002/ajmg.a.38516
Friedmann I, Campagnolo C, Chan N, Hardy G, Saleh M. TP63-mutation as a cause of prenatal lethal multicystic dysplastic kidneys. Mol Genet Genom Med. 2020;8:e1486.
Salinas CF, Montes GM. Rapp-Hodgkin syndrome: observations on ten cases and characteristic hair changes (pili canaliculi). Birth Defects Orig Artic Ser. 1988;24:149–68.
pubmed: 3179424
Leoyklang P, Siriwan P, Shotelersuk V. A mutation of the p63 gene in non-syndromic cleft lip. J Med Genet. 2006;43:e28.
doi: 10.1136/jmg.2005.036442
Rinne T, Brunner HG, van Bokhoven H. p63-Associated Disorders. Cell Cycle. 2007;6:262–8. https://doi.org/10.4161/cc.6.3.3796 .
doi: 10.4161/cc.6.3.3796 pubmed: 17224651
Jain P, Rathee M. Embryology, tongue. StatPearls:Treasure Island (FL); 2021.
Nie X. Apoptosis, proliferation and gene expression patterns in mouse developing tongue. Anat Embryol. 2005;210:125–32.
doi: 10.1007/s00429-005-0009-5
Parada C, Chai Y. Mandible and tongue development. Curr Top Dev Biol. 2015;115:31–58.
doi: 10.1016/bs.ctdb.2015.07.023
Surej KLK, Kurien NM, Sivan MP. Isolated congenital bifid tongue. Natl J Maxillofac Surg. 2010;1:187–9.
doi: 10.4103/0975-5950.79228
Marshall CB, Beeler JS, Lehmann BD, Gonzalez-Ericsson P, Sanchez V, Sanders ME et al. Tissue-specific expression of p73 and p63 isoforms in human tissues. Cell Death Dis. 2021;12:745.
Cefalù S, Lena AM, Vojtesek B, Musarò A, Rossi A, Melino G, et al. TAp63gamma is required for the late stages of myogenesis. Cell Cycle. 2015;14:894–901. https://doi.org/10.4161/15384101.2014.988021 .
doi: 10.4161/15384101.2014.988021 pubmed: 25790093 pmcid: 4615066
Sharma M, Castro-Piedras I, Simmons GE, Pruitt K. Dishevelled: a masterful conductor of complex Wnt signals. Cell Signal. 2018;47:52–64.
doi: 10.1016/j.cellsig.2018.03.004
Kurosaka H, Iulianella A, Williams T, Trainor PA. Disrupting hedgehog and WNT signaling interactions promotes cleft lip pathogenesis. J Clin Investig. 2014;124:1660–71.
doi: 10.1172/JCI72688
Zhu X-J, Yuan X, Wang M, Fang Y, Liu Y, Zhang X, et al. A Wnt/Notch/Pax7 signaling network supports tissue integrity in tongue development. J Biol Chem. 2017;292:9409–19.
doi: 10.1074/jbc.M117.789438
Drewelus I, Göpfert C, Hippel C, Dickmanns A, Damianitsch K, Pieler T, et al. p63 antagonizes Wnt-induced transcription. Cell Cycle. 2010;9:580–7.
doi: 10.4161/cc.9.3.10593
Li J, Yuan Y, He J, Feng J, Han X, Jing J, et al. Constitutive activation of hedgehog signaling adversely affects epithelial cell fate during palatal fusion. Dev Biol. 2018;441:191–203.
doi: 10.1016/j.ydbio.2018.07.003
Haas M, Gómez Vázquez JL, Sun DI, Tran HT, Brislinger M, Tasca A, et al. ΔN-Tp63 mediates Wnt/β-catenin-induced inhibition of differentiation in basal stem cells of mucociliary epithelia. Cell Rep. 2019;28:3338–3352. e6
doi: 10.1016/j.celrep.2019.08.063
Pries C, Mittelman D, Miller M, Solomon LM, Pashayan HM, Pruzansky S. The EEC syndrome. Am J Dis Child. 1974;127:840–4.
pubmed: 4209740
Köhler S, Gargano M, Matentzoglu N, Carmody LC, Lewis-Smith D, Vasilevsky NA, et al. The human phenotype ontology in 2021. Nucleic Acids Res. 2021;49:D1207–D1217.
doi: 10.1093/nar/gkaa1043

Auteurs

Julia Schmidt (J)

Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany. julia.schmidt1@med.uni-goettingen.de.

Gudrun Schreiber (G)

Department of Pediatric Neurology, Klinikum Kassel, Kassel, Germany.

Janine Altmüller (J)

Cologne Center for Genomics (CCG), University of Cologne, Faculty of Medicine, University Hospital Cologne, Cologne, Germany.
Center for Molecular Medicine Cologne (CMMC), University of Cologne, Faculty of Medicine, University Hospital Cologne, Cologne, Germany.
Berlin Institute of Health at Charité, Core Facility Genomics, Berlin, Germany.
Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany.

Holger Thiele (H)

Cologne Center for Genomics (CCG), University of Cologne, Faculty of Medicine, University Hospital Cologne, Cologne, Germany.
Center for Molecular Medicine Cologne (CMMC), University of Cologne, Faculty of Medicine, University Hospital Cologne, Cologne, Germany.

Peter Nürnberg (P)

Cologne Center for Genomics (CCG), University of Cologne, Faculty of Medicine, University Hospital Cologne, Cologne, Germany.
Center for Molecular Medicine Cologne (CMMC), University of Cologne, Faculty of Medicine, University Hospital Cologne, Cologne, Germany.

Yun Li (Y)

Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany.

Silke Kaulfuß (S)

Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany.

Rudolf Funke (R)

Department of Pediatric Neurology, Klinikum Kassel, Kassel, Germany.

Bernd Wilken (B)

Department of Pediatric Neurology, Klinikum Kassel, Kassel, Germany.

Gökhan Yigit (G)

Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany.

Bernd Wollnik (B)

Institute of Human Genetics, University Medical Center Göttingen, Göttingen, Germany.
Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Göttingen, Germany.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH