Microproteins: a 3D protein structure prediction analysis.
Gene ontology
ligand binding sites
microproteins
protein structure
protein structure prediction
Journal
Journal of biomolecular structure & dynamics
ISSN: 1538-0254
Titre abrégé: J Biomol Struct Dyn
Pays: England
ID NLM: 8404176
Informations de publication
Date de publication:
2022
2022
Historique:
pubmed:
28
10
2021
medline:
29
12
2022
entrez:
27
10
2021
Statut:
ppublish
Résumé
Microproteins are a novel and expanding group of small proteins encoded by less than 100-150 codons that are translated from small open reading frames (smORFs). It has been shown that smORFs and their corresponding microproteins make up a sizable fraction of the genome and proteome, but very little information on microproteins' structural features exists in the literature. In this paper, we present the results of analyzing the predicted structures of 44 microproteins. The results show that this set of microproteins have a different amino acid composition profiles, similar structural characteristics and fewer small-molecule ligand binding sites than regular proteins.Communicated by Ramaswamy H. Sarma.
Identifiants
pubmed: 34705603
doi: 10.1080/07391102.2021.1993343
pmc: PMC9489054
mid: NIHMS1834954
doi:
Substances chimiques
Proteins
0
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
13738-13746Subventions
Organisme : NCATS NIH HHS
ID : UL1 TR001067
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR002538
Pays : United States