Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia.
Adaptation, Physiological
/ genetics
Carbon Isotopes
/ analysis
Conservation of Natural Resources
Droughts
Genome, Plant
/ genetics
Genome-Wide Association Study
Multifactorial Inheritance
/ genetics
Osmotic Pressure
Phenotype
Plant Stomata
/ genetics
Sequoia
/ genetics
Sequoiadendron
/ genetics
Signal Transduction
/ genetics
Xylem
/ genetics
Sequoia sempervirens
Sequoiadendron giganteum
GWAS
carbon isotope discrimination
drought
osmotic pressure
polygenic traits
stomata
xylem
Journal
The Plant journal : for cell and molecular biology
ISSN: 1365-313X
Titre abrégé: Plant J
Pays: England
ID NLM: 9207397
Informations de publication
Date de publication:
01 2022
01 2022
Historique:
revised:
05
11
2021
received:
03
08
2021
accepted:
16
11
2021
pubmed:
21
11
2021
medline:
1
2
2022
entrez:
20
11
2021
Statut:
ppublish
Résumé
Drought is a major limitation for survival and growth in plants. With more frequent and severe drought episodes occurring due to climate change, it is imperative to understand the genomic and physiological basis of drought tolerance to be able to predict how species will respond in the future. In this study, univariate and multitrait multivariate genome-wide association study methods were used to identify candidate genes in two iconic and ecosystem-dominating species of the western USA, coast redwood and giant sequoia, using 10 drought-related physiological and anatomical traits and genome-wide sequence-capture single nucleotide polymorphisms. Population-level phenotypic variation was found in carbon isotope discrimination, osmotic pressure at full turgor, xylem hydraulic diameter, and total area of transporting fibers in both species. Our study identified new 78 new marker × trait associations in coast redwood and six in giant sequoia, with genes involved in a range of metabolic, stress, and signaling pathways, among other functions. This study contributes to a better understanding of the genomic basis of drought tolerance in long-generation conifers and helps guide current and future conservation efforts in the species.
Substances chimiques
Carbon Isotopes
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
7-22Commentaires et corrections
Type : CommentIn
Informations de copyright
© 2021 Society for Experimental Biology and John Wiley & Sons Ltd.
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