Mangrove microbiome reveals importance of sulfur metabolism in tropical coastal waters.

Amazon Biogeochemical cycles Estuary Mangrove Metagenomics

Journal

The Science of the total environment
ISSN: 1879-1026
Titre abrégé: Sci Total Environ
Pays: Netherlands
ID NLM: 0330500

Informations de publication

Date de publication:
20 Mar 2022
Historique:
received: 20 10 2021
revised: 17 11 2021
accepted: 18 11 2021
pubmed: 27 11 2021
medline: 9 2 2022
entrez: 26 11 2021
Statut: ppublish

Résumé

Mangroves under macro-tidal regimes are global carbon sequestration hotspots but the microbial drivers of biogeochemical cycles remain poorly understood. Here, we investigate the drivers of mangrove microbial community composition across a porewater-creek-estuary-ocean continuum. Observations were performed on the Amazon region in one of the largest mangrove systems worldwide with effective sequestration of organic carbon buried in soils and dissolved carbon via outwelling to the ocean. The potential export to the adjacent oceanic region ranged from 57 to 380 kg of dissolved and particulate organic carbon per second (up to 33 thousand tons C per day). Macro tides modulated microbial communities and their metabolic processes, e.g., anoxygenic phototrophy, sulfur, and nitrogen cycling. Respiration, sulfur metabolism and dissolved organic carbon (DOC) levels were linked to functional groups and microbial cell counts. Total microbial counts decreased and cyanobacteria counts peaked in the spring tide. The microbial groups driving carbon, nitrogen, sulfur and methane cycles were consistent across all spatial scales. Taxonomic groups engaged in sulfur cycling (Allochromatium, Desulfovibrio, and Thibacillus) within mangroves were abundant at all scales. Tidally-driven porewater exchange within mangroves drove a progressive increase of sulfur cycle taxonomic groups and their functional genes both temporally (tidal cycles) and spatially (from mangrove porewater to continental shelf). Overall, we revealed a unified and consistent response of microbiomes at different spatial and temporal scales to tidally-driven mangrove porewater exchange.

Identifiants

pubmed: 34826491
pii: S0048-9697(21)06965-5
doi: 10.1016/j.scitotenv.2021.151889
pii:
doi:

Substances chimiques

Sulfur 70FD1KFU70
Carbon 7440-44-0
Nitrogen N762921K75

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

151889

Informations de copyright

Copyright © 2021. Published by Elsevier B.V.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Maria S Nóbrega (MS)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Bruno S Silva (BS)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Diogo A Tschoeke (DA)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil; Center of Technology-COPPE, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Luciana R Appolinario (LR)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Gabriela Calegario (G)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Taina M Venas (TM)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Larissa Macedo (L)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil.

Nils Asp (N)

Universidade Federal do Pará (UFPA), Instituto de Estudos Costeiros (IECOS), Campus de Bragança, Pará, Brazil.

Braulio Cherene (B)

Laboratory of Environmental Sciences (LCA), Center of Biosciences and Biotechnology (CBB), State University of Northern of Rio de Janeiro Darcy Ribeiro (UENF), Campos dos goytacazes, Brazil.

Jomar S J Marques (JSJ)

Laboratory of Environmental Sciences (LCA), Center of Biosciences and Biotechnology (CBB), State University of Northern of Rio de Janeiro Darcy Ribeiro (UENF), Campos dos goytacazes, Brazil.

Michael Seidel (M)

Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Oldenburg, Germany.

Thorsten Dittmar (T)

Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Oldenburg, Germany.

Isaac R Santos (IR)

Department of Marine Sciences, University of Gothenburg, Sweden; National Marine Science Centre, Southern Cross University, Coffs Harbour, Australia.

Carlos Eduardo de Rezende (CE)

Laboratory of Environmental Sciences (LCA), Center of Biosciences and Biotechnology (CBB), State University of Northern of Rio de Janeiro Darcy Ribeiro (UENF), Campos dos goytacazes, Brazil.

Cristiane C Thompson (CC)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil; Center of Technology-COPPE, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil. Electronic address: thompsoncristiane@gmail.com.

Fabiano L Thompson (FL)

Laboratory of Microbiology, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil; Center of Technology-COPPE, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil. Electronic address: fabianothompson1@gmail.com.

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Classifications MeSH