Substitution of distal and active site residues reduces product inhibition of E1 from Acidothermus Cellulolyticus.

cellobiose inhibition cellulosic biofuels endoglucanase enzyme engineering heteronuclear single quantum coherence NMR molecular dynamics

Journal

Protein engineering, design & selection : PEDS
ISSN: 1741-0134
Titre abrégé: Protein Eng Des Sel
Pays: England
ID NLM: 101186484

Informations de publication

Date de publication:
15 02 2021
Historique:
received: 22 09 2021
revised: 22 09 2021
accepted: 13 11 2021
entrez: 22 12 2021
pubmed: 23 12 2021
medline: 29 1 2022
Statut: ppublish

Résumé

Cellulases are largely afflicted by inhibition from their reaction products, especially at high-substrate loading, which represents a major challenge for biomass processing. This challenge was overcome for endoglucanase 1 (E1) from Acidothermus cellulolyticus by identifying a large conformational change involving distal residues upon binding cellobiose. Having introduced alanine substitutions at each of these residues, we identified several mutations that reduced cellobiose inhibition of E1, including W212A, W213A, Q247A, W249A and F250A. One of the mutations (W212A) resulted in a 47-fold decrease in binding affinity of cellobiose as well as a 5-fold increase in the kcat. The mutation further increased E1 activity on Avicel and dilute-acid treated corn stover and enhanced its productivity at high-substrate loadings. These findings were corroborated by funnel metadynamics, which showed that the W212A substitution led to reduced affinity for cellobiose in the +1 and +2 binding sites due to rearrangement of key cellobiose-binding residues.

Identifiants

pubmed: 34935952
pii: 6476618
doi: 10.1093/protein/gzab031
pii:
doi:

Substances chimiques

Cellobiose 16462-44-5
Cellulases EC 3.2.1.-
endoglucanase 1 EC 3.2.1.-
Cellulase EC 3.2.1.4

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© The Author(s) 2021. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Auteurs

Samantha R Summers (SR)

Department of Chemical and Biological Engineering, University of Colorado, 3415 Colorado Avenue, Boulder, CO 80309, USA.

Sarah Alamdari (S)

Department of Chemical Engineering, University of Washington, 3781 Okanogan Lane NE, Seattle, WA 98195-1750, USA.

Casey J Kraft (CJ)

Department of Chemical and Biological Engineering, University of Colorado, 3415 Colorado Avenue, Boulder, CO 80309, USA.

Roman Brunecky (R)

Biosciences Center, National Renewable Energy Lab, 15013 Denver W Pkwy, Golden, CO 80401, USA.

Jim Pfaendtner (J)

Department of Chemical Engineering, University of Washington, 3781 Okanogan Lane NE, Seattle, WA 98195-1750, USA.

Joel L Kaar (JL)

Department of Chemical and Biological Engineering, University of Colorado, 3415 Colorado Avenue, Boulder, CO 80309, USA.

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