Multiscale analysis of the randomization limits of the chromosomal gene organization between Lepidoptera and Diptera.

Animals Butterflies / genetics Chromosomes / genetics Diptera / genetics Drosophila melanogaster / genetics Evolution, Molecular Lepidoptera Phylogeny Random Allocation
Diptera Lepidoptera developmental gene clusters genome evolution macrosynteny conservation microsynteny conservation

Journal

Proceedings. Biological sciences
ISSN: 1471-2954
Titre abrégé: Proc Biol Sci
Pays: England
ID NLM: 101245157

Informations de publication

Date de publication:
26 01 2022
Historique:
entrez: 19 1 2022
pubmed: 20 1 2022
medline: 17 5 2022
Statut: ppublish

Résumé

How chromosome gene organization and gene content evolve among distantly related and structurally malleable genomes remains unresolved. This is particularly the case when considering different insect orders. We have compared the highly contiguous genome assemblies of the lepidopteran

Identifiants

DOI: 10.1098/rspb.2021.2183 PMID: 35042416 PMC: PMC8767184
pubmed: 35042416
doi: 10.1098/rspb.2021.2183
pmc: PMC8767184
doi:

Banques de données

figshare
['10.6084/m9.figshare.c.5762517']

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

20212183

Références

Genetics. 2008 Jul;179(3):1657-80
pubmed: 18622036
Curr Opin Insect Sci. 2015 Feb;7:15-23
pubmed: 32846661
Annu Rev Entomol. 2012;57:449-68
pubmed: 22149269
Crit Care. 2004 Feb;8(1):46-53
pubmed: 14975045
G3 (Bethesda). 2012 Feb;2(2):313-9
pubmed: 22384409
Genome Res. 2012 Dec;22(12):2356-67
pubmed: 22722344
Nucleic Acids Res. 2015 Jan;43(Database issue):D690-7
pubmed: 25398896
Science. 2002 Oct 4;298(5591):149-59
pubmed: 12364792
Nat Rev Genet. 2010 Jul;11(7):487-98
pubmed: 20548290
Genome Res. 2000 Apr;10(4):577-86
pubmed: 10779500
Nat Rev Genet. 2015 Nov;16(11):627-40
pubmed: 26442640
Development. 2007 Jul;134(14):2549-60
pubmed: 17553908
Heredity (Edinb). 2013 Mar;110(3):283-95
pubmed: 23211790
Nat Rev Genet. 2005 Dec;6(12):881-92
pubmed: 16341069
Int J Evol Biol. 2012;2012:846421
pubmed: 22919542
Nature. 2015 Nov 26;527(7579):459-65
pubmed: 26580012
G3 (Bethesda). 2017 Oct 5;7(10):3281-3294
pubmed: 28839116
Mol Syst Biol. 2011 Oct 11;7:539
pubmed: 21988835
PLoS Genet. 2009 Feb;5(2):e1000366
pubmed: 19197358
BMC Genomics. 2015 Sep 18;16:712
pubmed: 26384649
Genome Res. 2010 Aug;20(8):1084-96
pubmed: 20601587
Genome Res. 2007 May;17(5):545-55
pubmed: 17387144
PLoS Biol. 2014 Nov 25;12(11):e1002005
pubmed: 25423365
Trends Ecol Evol. 2018 Jun;33(6):427-440
pubmed: 29731154
J Evol Biol. 2018 Apr;31(4):516-529
pubmed: 29322640
Insect Mol Biol. 2019 Dec;28(6):739-758
pubmed: 31120160
Evolution. 1949 Sep;3(3):252-61
pubmed: 18138385
Genetics. 1946 Jan;31(1):95-113
pubmed: 17247187
Dev Genes Evol. 2009 Oct;219(9-10):481-96
pubmed: 20112453
Sci China Life Sci. 2019 Apr;62(4):467-488
pubmed: 30810961
Genetics. 2007 Sep;177(1):417-26
pubmed: 17603110
BMC Genomics. 2008 Nov 25;9:558
pubmed: 19032778
Development. 2009 Sep;136(18):3153-60
pubmed: 19700619
Science. 2014 Nov 7;346(6210):763-7
pubmed: 25378627
Genome Biol Evol. 2021 Aug 3;13(8):
pubmed: 34152413
Nature. 2007 Nov 8;450(7167):203-18
pubmed: 17994087
Arthropod Struct Dev. 2019 Jan;48:12-19
pubmed: 30447338
Commun Biol. 2021 Jun 25;4(1):791
pubmed: 34172835
PLoS Genet. 2012 Feb;8(2):e1002475
pubmed: 22319453
Bioinformatics. 2005 Mar 1;21(5):650-9
pubmed: 15388519
PLoS Genet. 2020 Jul 30;16(7):e1008918
pubmed: 32730246
Genome Biol. 2019 Nov 14;20(1):238
pubmed: 31727128
Proc Natl Acad Sci U S A. 2010 Apr 27;107(17):7680-5
pubmed: 20388903
Nat Genet. 2018 Jan;50(1):20-25
pubmed: 29255259
BMC Biol. 2019 Dec 5;17(1):100
pubmed: 31806031
Nat Commun. 2015 Mar 05;6:6509
pubmed: 25739651
Cytogenet Genome Res. 2017;153(1):46-53
pubmed: 29130975
Genome Biol Evol. 2021 May 7;13(5):
pubmed: 33739390
Nature. 2013 Jul 18;499(7458):332-5
pubmed: 23792562
Mol Biol Evol. 2012 Jun;29(6):1645-53
pubmed: 22319158
BMC Biol. 2006 Dec 07;4:41
pubmed: 17156431
PLoS Genet. 2014 Oct 23;10(10):e1004698
pubmed: 25340822
Insect Biochem Mol Biol. 2008 Dec;38(12):1111-20
pubmed: 19280701
Bioinformatics. 2002 Mar;18(3):492-3
pubmed: 11934753
Nature. 2012 Jul 5;487(7405):94-8
pubmed: 22722851
Genome Biol. 2015 Aug 06;16:157
pubmed: 26243257
Int J Mol Sci. 2019 Mar 11;20(5):
pubmed: 30862048
Mol Genet Genomics. 2007 Nov;278(5):487-91
pubmed: 17851692
Science. 2015 Jan 2;347(6217):1258522
pubmed: 25554792

Auteurs

José M Ranz (JM)

Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine CA 92647, USA.
ORCID: 0000-0003-3585-3129

Pablo M González (PM)

Unidad de Genómica Avanzada (Langebio), CINVESTAV, Irapuato GTO 36824, México.

Ryan N Su (RN)

Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine CA 92647, USA.

Sarah J Bedford (SJ)

Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine CA 92647, USA.

Cei Abreu-Goodger (C)

Unidad de Genómica Avanzada (Langebio), CINVESTAV, Irapuato GTO 36824, México.

Therese Markow (T)

Unidad de Genómica Avanzada (Langebio), CINVESTAV, Irapuato GTO 36824, México.
Section of Cell and Developmental Biology, Division of Biological Sciences, University of California San Diego, La Jolla, CA 92093, USA.

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Classifications MeSH

questionsmedicales.fr › Eucaryotes › Animaux › Multiscale analysis of the randomization...
questionsmedicales.fr › Eucaryotes › Animaux › Invertébrés › Arthropodes › Insectes › Pterygota › Neoptera › Holometabola › Lepidoptera › Papillons › Multiscale analysis of the randomization...
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Chromosomes › Multiscale analysis of the randomization...
questionsmedicales.fr › Eucaryotes › Animaux › Invertébrés › Arthropodes › Insectes › Pterygota › Neoptera › Holometabola › Diptera › Multiscale analysis of the randomization...
questionsmedicales.fr › Eucaryotes › Animaux › Invertébrés › Arthropodes › Insectes › Pterygota › Neoptera › Holometabola › Diptera › Drosophilidae › Drosophila › Drosophila melanogaster › Multiscale analysis of the randomization...
questionsmedicales.fr › Phénomènes biologiques › Évolution biologique › Évolution moléculaire › Multiscale analysis of the randomization...
questionsmedicales.fr › Eucaryotes › Animaux › Invertébrés › Arthropodes › Insectes › Pterygota › Neoptera › Holometabola › Lepidoptera › Multiscale analysis of the randomization...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Multiscale analysis of the randomization...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Méthodologie en recherche épidémiologique › Répartition aléatoire › Multiscale analysis of the randomization...